AT2G47630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.958 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62860.1); Has 2891 Blast hits to 2889 proteins in 983 species: Archae - 32; Bacteria - 1864; Metazoa - 111; Fungi - 108; Plants - 454; Viruses - 50; Other Eukaryotes - 272 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:19534637..19536911 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39711.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.39 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||
| Length | 351 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKSSEFQYHE EYVRNSRGVE LFACRWIPSS SSSPKALVFL CHGYGMECSD SMKECGIRLA SAGYAVFGMD YEGHGRSMGS RCYIKKFANV VNDCYDYYTS 101: ICAQEEYMDK GRFLYGESMG GAVTLLLHKK DPLFWNGAIL VAPMCKISEK VKPHPIVINL LTRVEEIIPK WKIVPTKDVI DAAFKDLVKR EEVRNNKLIY 201: QDKPRLKTAL EMLRTSMNLE DTLHEITMPF FVLHGEADTV TDPEVSKALY EKASTRDKTL KLYPGMWHAL TSGEPDCNVD LVFADIINWL DLRTADPASL 301: TVTPIRVGNT TSVQRVTTVN GVSNGHRRPK RPFFNLLCGL NRGRLVPRST V |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)