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AT2G22000.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : elicitor peptide 6 precursor
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
elicitor peptide 6 precursor (PROPEP6); Has 15 Blast hits to 15 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWFTeggNOG:ENOG41104YZEMBL:AC007019EMBL:BT021966
EMBL:BT024750EMBL:CP002685EnsemblPlants:AT2G22000EnsemblPlants:AT2G22000.1
entrez:816736GeneID:816736Genevisible:Q9SIZ9GO:GO:0006952
Gramene:AT2G22000.1HOGENOM:HOG000115498InParanoid:Q9SIZ9KEGG:ath:AT2G22000
OMA:VQAILKCPaxDb:Q9SIZ9Pfam:Q9SIZ9PIR:G84607
PRO:PR:Q9SIZ9Proteomes:UP000006548RefSeq:NP_179791.1STRING:3702.AT2G22000.1
TAIR:AT2G22000tair10-symbols:PROPEP6UniGene:At.48503UniProt:Q9SIZ9
Coordinates (TAIR10) chr2:+:9362408..9363002
Molecular Weight (calculated) 11633.40 Da
IEP (calculated) 4.50
GRAVY (calculated) -0.91
Length 104 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVNGEEERR SRREDEEKED YYYSLLNSPC SVCNKFVQAI LKCLGLESSS IPPSSSSSSP SLVEEEDSGT ETVEETGFMA RITAVLRRRP RPPPYSSGRP
101: GQNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)