AT2G45970.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.511 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 86, subfamily A, polypeptide 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 86, subfamily A, polypeptide 8 (CYP86A8); FUNCTIONS IN: alkane 1-monooxygenase activity, oxygen binding; INVOLVED IN: fatty acid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily A, polypeptide 4 (TAIR:AT1G01600.1); Has 27979 Blast hits to 27896 proteins in 1493 species: Archae - 44; Bacteria - 2538; Metazoa - 10315; Fungi - 6189; Plants - 7925; Viruses - 3; Other Eukaryotes - 965 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:18912548..18914161 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 60919.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.98 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 537 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEISTALMIL SAITAYFLWL TFISRCLKGP RVWPILGSLP GLIENCERMH DWISDNLRAC SGTYQTCICA IPFLAKKQGL VTVTCDPRNL EHILKNRFDN 101: YPKGPTWQAV FHDLLGQGIF NSDGDTWLFQ RKTAALEFTT RTLRQAMARW VNRAIKLRFL PILENARLGS EPIDLQDLLL RLTFDNICGL TFGKDPRTCA 201: PGLPVNTFAV AFDRATEASL QRFILPEILW KFKRWLRLGL EVSLTRSLVQ VDNYLSEIIT TRKEEMMTQH NNGKHHDDLL SRFIKKKESY SDETLQRVAL 301: NFILAGRDTS SVALSWFFWL ITQHPAIEDK ILREICTVLV ETRGDDVALW TDEPLSCEEL DRLVFLKAAL SETLRLYPSV PEDSKRAVKD DVLPDGTFVP 401: AGSSITYSIY SAGRMKSTWG EDCLEFKPER WISQSDGGRF INHDPFKFVA FNAGPRICLG KDLAYLQMKS IASAVLLRHR LTVVTGHKVE QKMSLTLFMK 501: YGLLVNVHER DLTAIAADLR ECKSNVVNDG VGNGVSS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)