AT2G44760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Domain of unknown function (DUF3598) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF3598 (InterPro:IPR022017); Has 41 Blast hits to 35 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18452937..18454785 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 55879.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.22 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||
| Length | 500 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MILQKTMQSP FLHLCKSFTS SSPLSCHNHN ICFGFHNALL SPSICNFQRR NNVNGRKIVA QGSRLNDGNS RPAGNKGKVS LKGNKENIWS VDNEMAEKDK 101: RKVKPKGRKS GKRLGGGRKG KFGRVLVSGT MLIESETVLQ TQEPVIKPVW RTFASSVSGI WKGVGAVFSP ITGEMEPIEI GKKNESLYDC YTLSKIEALP 201: SPSSGANTES EIQRKINWVT LNPHGECSES KDEVFVDQSG VDSRLPKFES FNLKASDVME EDSMVDAPGL VYFEDGSYSR GPVTIPVGEM SESNYYLTPT 301: FKFEQCLVKG CHKRLRVVHT IEFANGGADI QIMRVGVYEE LWVSPSNYEE QSDNDAPLEL KPFSQRKRTQ PSELTGSWKV FEVNATPLYG EEAEFEQPGE 401: STPVVYLCTE ALKRRNLPET LVSFGEEEMI DMQDVSVMWL PGGVSAYVDV KKDGVLCIGV GWYSDEGINL VMERDYGLDG NLKEVRSKSE MKRRWTEEPK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)