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AT2G43230.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.915
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59350.3); Has 105273 Blast hits to 104337 proteins in 4385 species: Archae - 99; Bacteria - 13148; Metazoa - 38275; Fungi - 8089; Plants - 30764; Viruses - 287; Other Eukaryotes - 14611 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G43230-MONOMERBioCyc:ARA:GQT-1247-MONOMEREMBL:AC004450EMBL:AY054533
EMBL:BT000153EMBL:CP002685EnsemblPlants:AT2G43230EnsemblPlants:AT2G43230.1
entrez:818924ExpressionAtlas:Q9ZW72GeneID:818924GO:GO:0004672
GO:GO:0005524Gramene:AT2G43230.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF115
HOGENOM:HOG000116550InterPro:IPR000719InterPro:IPR001245InterPro:IPR008266
InterPro:IPR011009InterPro:IPR017441InterPro:IPR020635Pfam:PF07714
Pfscan:PS50011PhylomeDB:Q9ZW72PIR:F84863PROSITE:PS00107
PROSITE:PS00109PROSITE:PS50011Proteomes:UP000006548Reactome:R-ATH-450302
Reactome:R-ATH-450321RefSeq:NP_565995.1scanprosite:PS00107scanprosite:PS00109
SMART:SM00219SMR:Q9ZW72SUPFAM:SSF56112TAIR:AT2G43230
UniGene:At.23097UniGene:At.68184UniProt:Q9ZW72
Coordinates (TAIR10) chr2:+:17966475..17968446
Molecular Weight (calculated) 45368.60 Da
IEP (calculated) 9.93
GRAVY (calculated) -0.47
Length 406 amino acids
Sequence (TAIR10)
(BLAST)
001: MDRDFHRRGQ VANDRTQSNF VRLDKPRAVD DLDIGKRGKM RRWLCCSCRV QESYPSAENN RLKTPPTRHY DYGRNNKKTP APVKPPVLKE PPPIDVPAMS
101: LVELKEKTQN FGSKALIGEG SYGRVYYANF NDGKAVAVKK LDNASEPETN VEFLTQVSKV SRLKSDNFVQ LLGYCVEGNL RVLAYEFATM RSLHDILHGR
201: KGVQGAQPGP TLEWMQRVRV AVDAAKGLEY LHEKVQPAVI HRDIRSSNVL IFEDFKAKIA DFNLSNQAPD MAARLHSTRV LGTFGYHAPE YAMTGQLTQK
301: SDVYSFGVVL LELLTGRKPV DHTMPRGQQS LVTWATPRLS EDKVKQCVDP KLKGEYPPKA VAKLAAVAAL CVQYEAEFRP NMSIVVKALQ PLLRSATAAA
401: PPTPQP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)