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AT2G33460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ROP-interactive CRIB motif-containing protein 1
Curator
Summary (TAIR10)
encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC3(family subgroup III). RIC1 is localized to the apical region of the plasma membrane in pollen tube and mutation analyses indicate that this localization is dependent on ROP1 binding. Gene is expressed in all tissues examined.Analysis of overexpression and loss of function mutants indicates a role in cortical microtubule organization during pavement cell morphogenesis.
Computational
Description (TAIR10)
ROP-interactive CRIB motif-containing protein 1 (RIC1); FUNCTIONS IN: protein binding; INVOLVED IN: cell morphogenesis, pollen tube growth, cellulose microfibril organization, cytoplasmic microtubule organization; LOCATED IN: cortical microtubule, transverse to long axis, apical plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); BEST Arabidopsis thaliana protein match is: ROP-interactive CRIB motif-containing protein 3 (TAIR:AT1G04450.1); Has 393 Blast hits to 355 proteins in 75 species: Archae - 0; Bacteria - 15; Metazoa - 105; Fungi - 14; Plants - 178; Viruses - 2; Other Eukaryotes - 79 (source: NCBI BLink).
Protein Annotations
BioGrid:3258eggNOG:ENOG410J2G9eggNOG:ENOG4111AXPEMBL:AC002332
EMBL:CP002685EnsemblPlants:AT2G33460EnsemblPlants:AT2G33460.1entrez:817911
Gene3D:3.90.810.10GeneID:817911Genevisible:F4IVV0GO:GO:0000902
GO:GO:0007275GO:GO:0009860GO:GO:0010005GO:GO:0010215
GO:GO:0016324GO:GO:0031122GO:GO:0040008Gramene:AT2G33460.1
hmmpanther:PTHR23177hmmpanther:PTHR23177:SF8InParanoid:F4IVV0InterPro:IPR000095
KEGG:ath:AT2G33460OMA:DEPSKHSPaxDb:F4IVV0Pfam:F4IVV0
Pfam:PF00786Pfscan:PS50108PIR:G84745PRIDE:F4IVV0
PRO:PR:F4IVV0PROSITE:PS50108ProteinModelPortal:F4IVV0Proteomes:UP000006548
RefSeq:NP_180904.2SMART:SM00285STRING:3702.AT2G33460.1TAIR:AT2G33460
tair10-symbols:RIC1UniGene:At.37923UniProt:F4IVV0
Coordinates (TAIR10) chr2:-:14174590..14175561
Molecular Weight (calculated) 24140.90 Da
IEP (calculated) 10.61
GRAVY (calculated) -1.28
Length 224 amino acids
Sequence (TAIR10)
(BLAST)
001: MATTMKGLLK GLRYITQIFD EEKEQEMQIG FPTDVKHVAH IGSDGPTNTT PSWMNDFKTQ EHEKGQVVSR GNSNKYNPQG TNQRGAGLKE LLPSNTNEKP
101: KQKTRRKPGG AASPNHNGSP PRKSSGNAAS SDEPSKHSRH NRSAHGSTDS SNDQEPSVRR RRGGIPAPDT EVPNQIPDGS APPRKATSRP RKLKGSSAGG
201: EGSIKKSSKG KPENSVDTTC NDII
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)