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AT1G61860.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.944
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G20530.1); Has 115036 Blast hits to 113792 proteins in 4152 species: Archae - 89; Bacteria - 13305; Metazoa - 42775; Fungi - 9531; Plants - 32685; Viruses - 325; Other Eukaryotes - 16326 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002684EnsemblPlants:AT1G61860
EnsemblPlants:AT1G61860.1entrez:842483Gene3D:2.60.120.200GeneID:842483
GO:GO:0004674GO:GO:0005524Gramene:AT1G61860.1hmmpanther:PTHR27001
hmmpanther:PTHR27001:SF127InParanoid:F4HX16InterPro:IPR000719InterPro:IPR001245
InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320InterPro:IPR017441
KEGG:ath:AT1G61860OMA:MKLCPCFPaxDb:F4HX16Pfam:PF07714
Pfscan:PS50011PRIDE:F4HX16PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:F4HX16Proteomes:UP000006548Reactome:R-ATH-450302
Reactome:R-ATH-450321RefSeq:NP_176379.2scanprosite:PS00107scanprosite:PS00108
SMR:F4HX16STRING:3702.AT1G61860.1SUPFAM:SSF56112TAIR:AT1G61860
UniGene:At.36357UniProt:F4HX16
Coordinates (TAIR10) chr1:-:22863079..22864619
Molecular Weight (calculated) 43514.00 Da
IEP (calculated) 6.25
GRAVY (calculated) -0.28
Length 389 amino acids
Sequence (TAIR10)
(BLAST)
001: MMKLCPCFIN PHQLGPNSPR DSFDEGLTAY RGHSRKLFAL FTFRSHRKGS CRQKYITEEI KKYGNVKNCG RIFKFKELIA ATDNFSMDCM IGEGGFGRVY
101: KGFLTSLNQV VAVKRLDRNG LQGTREFFAE VMVLSLAQHP NLVNLIGYCV EDEQRVLVYE FMPNGSLEDH LFDLPEGSPS LDWFTRMRIV HGAAKGLEYL
201: HDYADPPVIY RDFKASNILL QSDFNSKLSD FGLARLGPTE GKDHVSTRVM GTYGYCAPEY AMTGQLTAKS DVYSFGVVLL EIISGRRAID GDRPTEEQNL
301: ISWAEPLLKD RRMFAQIVDP NLDGNYPVKG LHQALAIAAM CLQEEAETRP LMGDVVTALE FLAKPIEVVD NTNTTPASPT QTSSSDSSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)