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AT2G43080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.795
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P4H isoform 1
Curator
Summary (TAIR10)
Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.
Computational
Description (TAIR10)
P4H isoform 1 (AT-P4H-1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, procollagen-proline 4-dioxygenase activity; INVOLVED IN: peptidyl-proline hydroxylation to 4-hydroxy-L-proline; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2440 Blast hits to 2431 proteins in 340 species: Archae - 0; Bacteria - 392; Metazoa - 982; Fungi - 96; Plants - 404; Viruses - 14; Other Eukaryotes - 552 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G43080-MONOMERBRENDA:1.14.11.2EC:1.14.11.2eggNOG:ENOG410XS5J
eggNOG:KOG1591EMBL:AC004450EMBL:AC006224EMBL:AK117688
EMBL:BT006098EMBL:CP002685EnsemblPlants:AT2G43080EnsemblPlants:AT2G43080.1
entrez:818910GeneID:818910Genevisible:Q9ZW86GO:GO:0004656
GO:GO:0005506GO:GO:0005789GO:GO:0005794GO:GO:0016021
GO:GO:0018401GO:GO:0031418Gramene:AT2G43080.1hmmpanther:PTHR10869
hmmpanther:PTHR10869:SF42HOGENOM:HOG000096858InParanoid:Q9ZW86InterPro:IPR005123
InterPro:IPR006620KEGG:ath:AT2G43080KO:K00472OMA:PNSIHGG
PaxDb:Q9ZW86Pfam:PF03171Pfam:PF13640Pfam:Q9ZW86
Pfscan:PS51471PhylomeDB:Q9ZW86PIR:G84861PRIDE:Q9ZW86
PRO:PR:Q9ZW86PROSITE:PS51471ProteinModelPortal:Q9ZW86Proteomes:UP000006548
RefSeq:NP_181836.1SMART:SM00702SMR:Q9ZW86STRING:3702.AT2G43080.1
TAIR:AT2G43080tair10-symbols:AT-P4H-1TMHMM:TMhelixUniGene:At.28123
UniProt:Q9ZW86
Coordinates (TAIR10) chr2:+:17915755..17918599
Molecular Weight (calculated) 31532.10 Da
IEP (calculated) 8.84
GRAVY (calculated) -0.19
Length 283 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPAMKIVFG LLTFVTVGMV IGSLLQLAFI NRLEDSYGTG FPSLRGLRGQ NTRYLRDVSR WANDKDAELL RIGNVKPEVV SWSPRIIVLH DFLSPEECEY
101: LKAIARPRLQ VSTVVDVKTG KGVKSDVRTS SGMFLTHVER SYPIIQAIEK RIAVFSQVPA ENGELIQVLR YEPQQFYKPH HDYFADTFNL KRGGQRVATM
201: LMYLTDDVEG GETYFPLAGD GDCTCGGKIM KGISVKPTKG DAVLFWSMGL DGQSDPRSIH GGCEVLSGEK WSATKWMRQK ATS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)