AT2G42960.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G59110.1); Has 122679 Blast hits to 121177 proteins in 4382 species: Archae - 116; Bacteria - 14606; Metazoa - 44944; Fungi - 10490; Plants - 33768; Viruses - 414; Other Eukaryotes - 18341 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:17868597..17870630 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55191.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.90 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 494 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPPESSLNAE MSKKISFFGL KGLKLWVWVC LVVGVFIVMI LCILSLWITF RRKSRRSSSK FPFNQIPHVS KDIRVDRAGF QNPHPESLYI EMNDKSTGKT 101: MMSHLGRTKS SDNDTLSQCS SVNHHERACS SHSGEEGGFG SAGRQYGGGP VTASPLVGLP EISHLGWGHW FTLRDLELAT NRFAPVNVLG EGGYGVVYRG 201: KLVNGTEVAV KKLLNNLGQA EKEFRVEVEA IGHVRHKNLV RLLGYCIEGV HRMLVYEYVN SGNLEQWLHG AMRQHGNLTW EARMKIITGT AQALAYLHEA 301: IEPKVVHRDI KASNILIDDE FNAKLSDFGL AKLLDSGESH ITTRVMGTFG YVAPEYANTG LLNEKSDIYS FGVLLLEAIT GRDPVDYGRP ANEVNLVEWL 401: KMMVGTRRAE EVVDPRLEPR PSKSALKRAL LVSLRCVDPE AEKRPRMSQV ARMLESDEHP FHKERRNKRS KTAGMEIVET KDESLGPSGS ETKP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)