AT1G01110.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : IQ-domain 18 | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
IQ-domain 18 (IQD18); FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: IQ-domain 17 (TAIR:AT4G00820.1); Has 1112 Blast hits to 678 proteins in 50 species: Archae - 0; Bacteria - 10; Metazoa - 109; Fungi - 16; Plants - 528; Viruses - 4; Other Eukaryotes - 445 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:53022..54494 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 41208.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.59 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.03 | ||||||||||||||||||||||||
| Length | 364 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTLRCMQALV RVQSRVLDQR KRLSHDGSRK SAFSDSHAVF ESRYLQDLSD RQSMSREGSS AAEDWDDRPH TIDAVKVMLQ RRRDTALRHD KTNLSQAFSQ 101: KMWRTVGNQS TEGHHEVELE EERPKWLDRW MATRPWDKRA SSRASVDQRV SVKTVEIDTS QPYSRTGAGS PSRGQRPSSP SRTSHHYQSR NNFSATPSPA 201: KSRPILIRSA SPRCQRDPRE DRDRAAYSYT SNTPSLRSNY SFTARSGCSI STTMVNNASL LPNYMASTES AKARIRSHSA PRQRPSTPER DRAGLVKKRL 301: SYPVPPPAEY EDNNSLRSPS FKSVAGSHFG GMLEQQSNYS SCCTESNGVE ISPASTSDFR NWLR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)