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AT2G42500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:22215637 (2012): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein phosphatase 2A-3
Curator
Summary (TAIR10)
Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].
Computational
Description (TAIR10)
protein phosphatase 2A-3 (PP2A-3); FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A-4 (TAIR:AT3G58500.1); Has 6823 Blast hits to 6634 proteins in 485 species: Archae - 80; Bacteria - 208; Metazoa - 2397; Fungi - 1409; Plants - 992; Viruses - 2; Other Eukaryotes - 1735 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G42500-MONOMERBioCyc:ARA:GQT-402-MONOMERBioGrid:4187EC:3.1.3.16
eggNOG:COG0639eggNOG:KOG0371EMBL:AC005956EMBL:AC007087
EMBL:BT010166EMBL:CP002685EMBL:M96841EMBL:U60135
EnsemblPlants:AT2G42500EnsemblPlants:AT2G42500.1entrez:818850ExpressionAtlas:Q07100
Gene3D:3.60.21.10GeneID:818850Genevisible:Q07100GO:GO:0004721
GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0005886
GO:GO:0006470GO:GO:0046872GO:GO:0048364GO:GO:0048863
GO:GO:0080022hmmpanther:PTHR11668hmmpanther:PTHR11668:SF287HOGENOM:HOG000172696
InParanoid:Q07100InterPro:IPR004843InterPro:IPR006186InterPro:IPR029052
OMA:KLSKCEPPaxDb:Q07100Pfam:PF00149Pfam:Q07100
PhylomeDB:Q07100PIR:S31163PIR:S52659PRIDE:Q07100
PRINTS:PR00114PRO:PR:Q07100PROSITE:PS00125ProteinModelPortal:Q07100
Proteomes:UP000006548RefSeq:NP_565974.1scanprosite:PS00125SMART:SM00156
SMR:Q07100STRING:3702.AT2G42500.1SUPFAM:SSF56300TAIR:AT2G42500
tair10-symbols:PP2A-3UniGene:At.20031UniProt:Q07100
Coordinates (TAIR10) chr2:-:17698099..17701226
Molecular Weight (calculated) 35834.50 Da
IEP (calculated) 4.78
GRAVY (calculated) -0.36
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MGANSIPTDA TIDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGMCP DTNYLFMGDY VDRGYYSVET
101: VTLLVALKMR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GYNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)