AT2G36970.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.985 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G28080.1); Has 6237 Blast hits to 6170 proteins in 304 species: Archae - 0; Bacteria - 63; Metazoa - 975; Fungi - 25; Plants - 5115; Viruses - 22; Other Eukaryotes - 37 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr2:+:15529050..15530712 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 54967.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.29 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 490 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MERAKSRKPH IMMIPYPLQG HVIPFVHLAI KLASHGFTIT FVNTDSIHHH ISTAHQDDAG DIFSAARSSG QHDIRYTTVS DGFPLDFDRS LNHDQFFEGI 101: LHVFSAHVDD LIAKLSRRDD PPVTCLIADT FYVWSSMICD KHNLVNVSFW TEPALVLNLY YHMDLLISNG HFKSLDNRKD VIDYVPGVKA IEPKDLMSYL 201: QVSDKDVDTN TVVYRILFKA FKDVKRADFV VCNTVQELEP DSLSALQAKQ PVYAIGPVFS TDSVVPTSLW AESDCTEWLK GRPTGSVLYV SFGSYAHVGK 301: KEIVEIAHGL LLSGISFIWV LRPDIVGSNV PDFLPAGFVD QAQDRGLVVQ WCCQMEVISN PAVGGFFTHC GWNSILESVW CGLPLLCYPL LTDQFTNRKL 401: VVDDWCIGIN LCEKKTITRD QVSANVKRLM NGETSSELRN NVEKVKRHLK DAVTTVGSSE TNFNLFVSEV RNRIETKLCN VNGLEISPSN |
||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)