AT2G34960.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cationic amino acid transporter 5 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane. | ||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cationic amino acid transporter 5 (CAT5); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 8 (TAIR:AT1G17120.1); Has 31271 Blast hits to 31152 proteins in 2294 species: Archae - 542; Bacteria - 25908; Metazoa - 1864; Fungi - 1511; Plants - 392; Viruses - 1; Other Eukaryotes - 1053 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:14744175..14745884 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 62639.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.05 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.54 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 569 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEGEERGYWR WSKRDFFPEE SFQSFGSYRA ALSQTCSRFK NRLVSRSDDE NERFELKKQS EHEMKRCLTW WDLVWFGFGS VIGAGIFVLT GQEAHEQAGP 101: AIVLSYVVSG LSAMLSVFCY TEFAVEIPVA GGSFAYLRIE LGDFAAFITA GNILLESIVG TAAVARAWTS YFATLLNRSP NALRIKTDLS SGFNLLDPIA 201: VVVIAASATI ASISTRKTSL LNWIASAINT LVIFFVIIAG FIHADTSNLT PFLPFGPEGV FRAAAVVYFA YGGFDSIATM AEETKNPSRD IPIGLLGSMS 301: IITVIYCLMA LSLSMMQKYT DIDPNAAYSV AFQSVGMKWG KYLVALGALK GMTTVLLVGA LGQARYVTHI ARTHMIPPIF ALVHPKTGTP INANLLVAIP 401: SALIAFFSGL DVLASLLSIS TLFIFTMMPI ALLVRRYYVR QDTPRVHLIK LITCLLFVVV SSMGTSAYWG MQRKGSWIGY TVTVPFWFLG TLGIVFFVPQ 501: QRTPKVWGVP LVPWLPCLSI ATNIFLMGSL GAMAFVRFGV CTLAMLLYYF LLGLHATFDM AHQQIVPRT |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)