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AT2G34960.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cationic amino acid transporter 5
Curator
Summary (TAIR10)
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane.
Computational
Description (TAIR10)
cationic amino acid transporter 5 (CAT5); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 8 (TAIR:AT1G17120.1); Has 31271 Blast hits to 31152 proteins in 2294 species: Archae - 542; Bacteria - 25908; Metazoa - 1864; Fungi - 1511; Plants - 392; Viruses - 1; Other Eukaryotes - 1053 (source: NCBI BLink).
Protein Annotations
BioGrid:3406eggNOG:COG0531eggNOG:KOG1286EMBL:AC004238
EMBL:AY090448EMBL:BT000623EMBL:CP002685EnsemblPlants:AT2G34960
EnsemblPlants:AT2G34960.1entrez:818060GeneID:818060Genevisible:O64759
GO:GO:0005886GO:GO:0015171GO:GO:0015297GO:GO:0016021
Gramene:AT2G34960.1hmmpanther:PTHR11785hmmpanther:PTHR11785:SF267HOGENOM:HOG000237636
InParanoid:O64759InterPro:IPR002293InterPro:IPR029485KEGG:ath:AT2G34960
OMA:HANTSNLPANTHER:PTHR11785PaxDb:O64759Pfam:O64759
Pfam:PF13520Pfam:PF13906PhylomeDB:O64759PIR:T00477
PRIDE:O64759PRO:PR:O64759ProteinModelPortal:O64759Proteomes:UP000006548
RefSeq:NP_181041.1SMR:O64759STRING:3702.AT2G34960.1TAIR:AT2G34960
tair10-symbols:CAT5TCDB:2.A.3.3.12TMHMM:TMhelixUniGene:At.37736
UniProt:O64759
Coordinates (TAIR10) chr2:-:14744175..14745884
Molecular Weight (calculated) 62639.00 Da
IEP (calculated) 9.05
GRAVY (calculated) 0.54
Length 569 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGEERGYWR WSKRDFFPEE SFQSFGSYRA ALSQTCSRFK NRLVSRSDDE NERFELKKQS EHEMKRCLTW WDLVWFGFGS VIGAGIFVLT GQEAHEQAGP
101: AIVLSYVVSG LSAMLSVFCY TEFAVEIPVA GGSFAYLRIE LGDFAAFITA GNILLESIVG TAAVARAWTS YFATLLNRSP NALRIKTDLS SGFNLLDPIA
201: VVVIAASATI ASISTRKTSL LNWIASAINT LVIFFVIIAG FIHADTSNLT PFLPFGPEGV FRAAAVVYFA YGGFDSIATM AEETKNPSRD IPIGLLGSMS
301: IITVIYCLMA LSLSMMQKYT DIDPNAAYSV AFQSVGMKWG KYLVALGALK GMTTVLLVGA LGQARYVTHI ARTHMIPPIF ALVHPKTGTP INANLLVAIP
401: SALIAFFSGL DVLASLLSIS TLFIFTMMPI ALLVRRYYVR QDTPRVHLIK LITCLLFVVV SSMGTSAYWG MQRKGSWIGY TVTVPFWFLG TLGIVFFVPQ
501: QRTPKVWGVP LVPWLPCLSI ATNIFLMGSL GAMAFVRFGV CTLAMLLYYF LLGLHATFDM AHQQIVPRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)