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AT2G36430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.658
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF247)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G22550.2); Has 1137 Blast hits to 1027 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJ60eggNOG:ENOG410YIDMEMBL:AC006919EMBL:AY074351
EMBL:AY114049EMBL:CP002685EnsemblPlants:AT2G36430EnsemblPlants:AT2G36430.1
entrez:818217GeneID:818217GO:GO:0016021Gramene:AT2G36430.1
hmmpanther:PTHR31549hmmpanther:PTHR31549:SF6HOGENOM:HOG000237813InterPro:IPR004158
KEGG:ath:AT2G36430OMA:CFVPKRPPfam:PF03140PhylomeDB:Q9SJR2
PIR:F84780Proteomes:UP000006548RefSeq:NP_181184.1TAIR:AT2G36430
TMHMM:TMhelixUniGene:At.14086UniGene:At.49098UniProt:Q9SJR2
Coordinates (TAIR10) chr2:+:15290211..15291557
Molecular Weight (calculated) 52020.50 Da
IEP (calculated) 5.47
GRAVY (calculated) -0.19
Length 448 amino acids
Sequence (TAIR10)
(BLAST)
001: MVDAAEQPPS TSEGESLLKI HIERMHKKLK EPPRLLSSAA GKPTCSIFRV PQSMIDCNGR CYEPRVVSIG PYHRGQTQLK MIEEHKWRYL NVLLTRTQNL
101: TLEDYMKSVK NVEEVARECY SETIHMDSEE FNEMMVLDGC FLLELFRKVN NLVPFEPNDP LVAMAWVLPF FYRDFLCLEN QIPFFVLETL FNLTRGDNEN
201: ETNASLQSLA FAFFNNMMHR TEEDLARFKE LRAKHLLDLL RSSFIPESEL HTPPATNPGK EKMPSHIIHS ISKLRRAGIK LRELKDAESF LVVRFRHGTI
301: EMPAITVDDF MSSFLENCVA YEQCHVACSM HFTTYATLLD CLTNTYKDVE YLCDQNIIEN YFGTDTELAK FVNSLGRDVA FDITQCYLKD LFEEVNEYYK
401: SSWHVEWATF KFTYFNSPWS FVSALAALVL LVLSVIQTIY TVFQAYQK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)