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AT2G35810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:22550958 (2012): plastid
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35830.2); Has 153 Blast hits to 153 proteins in 52 species: Archae - 0; Bacteria - 62; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
DNASU:818154eggNOG:ENOG410IW5VeggNOG:ENOG4111K8AEMBL:AY063956
EMBL:AY114072EMBL:CP002685EnsemblPlants:AT2G35810EnsemblPlants:AT2G35810.1
entrez:818154Gene3D:2.60.120.480GeneID:818154GO:GO:0004848
GO:GO:0005829Gramene:AT2G35810.1hmmpanther:PTHR35721hmmpanther:PTHR35721:SF1
HOGENOM:HOG000264542InterPro:IPR011051InterPro:IPR024060KEGG:00230+4.3.2.3
KEGG:ath:AT2G35810OMA:SAITHHAPhylomeDB:Q8VZP3Proteomes:UP000006548
RefSeq:NP_565825.2SMR:Q8VZP3STRING:3702.AT2G35810.1SUPFAM:SSF51182
TAIR:AT2G35810UniGene:At.27416UniGene:At.48554unipathway:UPA00395
UniProt:Q8VZP3
Coordinates (TAIR10) chr2:+:15049152..15050067
Molecular Weight (calculated) 22029.10 Da
IEP (calculated) 6.63
GRAVY (calculated) -0.28
Length 199 amino acids
Sequence (TAIR10)
(BLAST)
001: MQSSLSFSCG VKSTMAKSPV EVNLIPIEAT PETFAEYGQV IEASRDGAGY GPNDAQLDLS KGIPRLYILR LKETPLGFFK ITHHAKVTQC LGSIGGDIWY
101: MGVAKPSLIE DDDDGRRVDT VKAKSGHLYI PPEVEEIRVF RFSGPKFVKL HRGTWHAGPL FSGSSIMDFY NLELSNTNVV DHTSHDFTKN NGVSFRFDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)