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AT2G34500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 710, subfamily A, polypeptide 1
Curator
Summary (TAIR10)
Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of &beta;-sitosterol to stigmasterol, but not that of 24-<i>epi</i>-campesterol to brassicasterol (unlike CYP710A2).
Computational
Description (TAIR10)
cytochrome P450, family 710, subfamily A, polypeptide 1 (CYP710A1); FUNCTIONS IN: C-22 sterol desaturase activity, oxygen binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 710, subfamily A, polypeptide 2 (TAIR:AT2G34490.1); Has 25674 Blast hits to 25623 proteins in 1435 species: Archae - 46; Bacteria - 2777; Metazoa - 10394; Fungi - 4411; Plants - 7239; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G34500-MONOMERBioCyc:MetaCyc:AT2G34500-MONOMEREC:1.14.19.41eggNOG:COG2124
eggNOG:KOG0157EMBL:AB219423EMBL:AC004077EMBL:AC004481
EMBL:BT002069EMBL:BT010554EMBL:CP002685EnsemblPlants:AT2G34500
EnsemblPlants:AT2G34500.1entrez:818013Gene3D:1.10.630.10GeneID:818013
Genevisible:O64697GO:GO:0000249GO:GO:0004497GO:GO:0005506
GO:GO:0005886GO:GO:0016021GO:GO:0016126GO:GO:0020037
Gramene:AT2G34500.1gramene_pathway:1.3.1.-gramene_pathway:PWY-2541hmmpanther:PTHR24286
hmmpanther:PTHR24286:SF0HOGENOM:HOG000237640InParanoid:O64697InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT2G34500KO:K09832
OMA:AWYGKKAPaxDb:O64697Pfam:O64697Pfam:PF00067
PhylomeDB:O64697PIR:T02337PRINTS:PR00385PRINTS:PR00463
PRO:PR:O64697PROSITE:PS00086ProteinModelPortal:O64697Proteomes:UP000006548
RefSeq:NP_180997.1scanprosite:PS00086SMR:O64697STRING:3702.AT2G34500.1
SUPFAM:SSF48264TAIR:AT2G34500tair10-symbols:CYP710A1TMHMM:TMhelix
UniGene:At.27806UniGene:At.67747UniPathway:UPA00766UniProt:O64697
Coordinates (TAIR10) chr2:-:14539712..14541199
Molecular Weight (calculated) 55727.00 Da
IEP (calculated) 7.87
GRAVY (calculated) -0.05
Length 495 amino acids
Sequence (TAIR10)
(BLAST)
001: MVFSVSIFAS LAPYLISAFL LFLLVEQLSY LFKKRNIPGP FFVPPIIGNA VALVRDPTSF WDKQSSTANI SGLSANYLIG KFIVYIRDTE LSHQIFSNVR
101: PDAFHLIGHP FGKKLFGDHN LIYMFGEDHK SVRRQLAPNF TPKALSTYSA LQQLVILRHL RQWEGSTSGG SRPVSLRQLV RELNLETSQT VFVGPYLDKE
201: AKNRFRTDYN LFNLGSMALP IDLPGFAFGE ARRAVKRLGE TLGICAGKSK ARMAAGEEPA CLIDFWMQAI VAENPQPPHS GDEEIGGLLF DFLFAAQDAS
301: TSSLLWAVTL LDSEPEVLNR VREEVAKIWS PESNALITVD QLAEMKYTRS VAREVIRYRP PATMVPHVAA IDFPLTETYT IPKGTIVFPS VFDSSFQGFT
401: EPDRFDPDRF SETRQEDQVF KRNFLAFGWG PHQCVGQRYA LNHLVLFIAM FSSLLDFKRL RSDGCDEIVY CPTISPKDGC TVFLSRRVAK YPNFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)