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AT2G34080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT1G29090.1); Has 1344 Blast hits to 1324 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1342; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G34080-MONOMEReggNOG:COG4870eggNOG:KOG1543EMBL:AC002341
EMBL:CP002685EnsemblPlants:AT2G34080EnsemblPlants:AT2G34080.1entrez:817969
GeneID:817969GO:GO:0008234Gramene:AT2G34080.1hmmpanther:PTHR12411
hmmpanther:PTHR12411:SF333HOGENOM:HOG000230773InterPro:IPR000169InterPro:IPR000668
InterPro:IPR013128InterPro:IPR013201InterPro:IPR025661KEGG:ath:AT2G34080
MEROPS:I29.003OMA:NEFADITPANTHER:PTHR12411Pfam:PF00112
Pfam:PF08246PhylomeDB:O22961PIR:B84752PRINTS:PR00705
PROSITE:PS00139PROSITE:PS00640Proteomes:UP000006548RefSeq:NP_565780.1
scanprosite:PS00139scanprosite:PS00640SMART:SM00645SMART:SM00848
SMR:O22961SUPFAM:SSF54001TAIR:AT2G34080TMHMM:TMhelix
UniGene:At.28613UniGene:At.37859UniProt:O22961
Coordinates (TAIR10) chr2:-:14393431..14394777
Molecular Weight (calculated) 38269.10 Da
IEP (calculated) 7.31
GRAVY (calculated) -0.35
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MASIMVLVTV LIILFTGFRI SQATSRTVIF REQSMVDKHE QWMARFSREY RDELEKNMRR DVFKKNLKFI ENFNKKGNKS YKLGVNEFAD WTNEEFLAIH
101: TGLKGLTEVS PSKVVAKTIS SQTWNVSDMV VESKDWRAEG AVTPVKYQGQ CGCCWAFSAV AAVEGVAKIA GGNLVSLSEQ QLLDCDREYD RGCDGGIMSD
201: AFNYVVQNRG IASENDYSYQ GSDGGCRSNA RPAARISGFQ TVPSNNERAL LEAVSRQPVS VSMDATGDGF MHYSGGVYDG PCGTSSNHAV TFVGYGTSQD
301: GTKYWLAKNS WGETWGEKGY IRIRRDVAWP QGMCGVAQYA FYPVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)