suba logo
AT2G33420.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF810)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT1G04470.1); Has 196 Blast hits to 182 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIAFeggNOG:ENOG410YEIEEMBL:AC002332EMBL:CP002685
EnsemblPlants:AT2G33420EnsemblPlants:AT2G33420.1entrez:817906GeneID:817906
Gramene:AT2G33420.1hmmpanther:PTHR31280hmmpanther:PTHR31280:SF1HOGENOM:HOG000242769
InterPro:IPR008528InterPro:IPR014770InterPro:IPR014772KEGG:ath:AT2G33420
OMA:IHDWSEKPfam:PF05664Pfscan:PS51258Pfscan:PS51259
PhylomeDB:O22792PIR:C84745PROSITE:PS51258PROSITE:PS51259
Proteomes:UP000006548RefSeq:NP_180900.1TAIR:AT2G33420UniGene:At.37928
UniProt:O22792
Coordinates (TAIR10) chr2:+:14158782..14162304
Molecular Weight (calculated) 116310.00 Da
IEP (calculated) 8.15
GRAVY (calculated) -0.32
Length 1039 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTHHHRRESF SVTPSTMGGS VVLCPNTDLL WPFGKLEGLD RDDIRETAYE IFFTACRSSP GFGGRTALTF YSNHNSNDHH GDGGGGIGSG GSTGVGSGFG
0101: SSGRKEVVTT PTSRVKRALG LKMLKRSPSR RMSTIGAAGG AATSLSPGGM NSSAGHISPG AGFLTVQPSR PRRPLTSAEI MRQQMKVTEQ SDSRLRKTLL
0201: RTLVGQTGRR AETIILPLEL LRHLKTSEFG DIHEYQLWQR RQLKVLEAGL LLHPSIPLDK TNNFAMRLRE VVRQSETKPI DTSKTSDTMR TLTNVVVSLS
0301: WRGTNGNPTD VCHWADGYPL NIHLYVALLQ SIFDVRDETL VLDEIDELLE LMKKTWSTLG ITRPIHNLCF TWVLFHQYVV TSQMEPDLLG ASHAMLAEVA
0401: NDAKKLDREA LYVKLLNSTL ASMQGWTEKR LLSYHDYFQR GNVGLIENLL PLALSSSRIL GEDVTISQGK GQEKGDVKLV DHSGDRVDYY IRSSIKNAFS
0501: KVIENTKAKI AATDEGEEAA GTLLQLAKET EELALREREC FSPILKRWHS VAAGVASVSL HQCYGSILMQ YLAGRSFISR DTVEVLQTAG KLEKVLVQMV
0601: AEDSEECEDG GKGLVREMVP YEVDSIILRL LRQWVEEKLK AVQECLFRAK ETETWNPKSK SEPYAQSAGE LMKLAKDTID EFFEIPIGIT EDLVHDIAEG
0701: LEQLFQEYTT FVASCGARQS YIPTLPPLTR CNRDSRFVKL WKRATPCTTS NEDLKYTTSV ISDGHHPRPS TSRGTQRLYI RLNTLHFLSS HIHSLNKTLS
0801: LNPRILPATR KRYRHRNNNS SSYFDFTYAG IESACQHVSE VAAYRLIFLD SNSVLYESLY VGEVANARIR PALRIMKQNL TLMSAILADR AQSLAMREVM
0901: KSSFEAFLMV LLAGGYSRVF YRSDHSIIEE DFENLKRVFC TCGEGLIPEE VVDREAETVE GVIQLMSQPT EQLMEDFSIV TCETSGMGMV GSGQKLPMPP
1001: TTGRWNRSDP NTILRVLCHR NDRVANQFLK KSFQLPKRR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)