suba logo
AT3G18810.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.859
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49270.1); Has 358517 Blast hits to 170503 proteins in 5329 species: Archae - 673; Bacteria - 45340; Metazoa - 63900; Fungi - 24855; Plants - 39134; Viruses - 3054; Other Eukaryotes - 181561 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G18810-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187
EMBL:AB026654EMBL:CP002686EnsemblPlants:AT3G18810EnsemblPlants:AT3G18810.1
entrez:821414GeneID:821414Genevisible:Q9LS95GO:GO:0004674
GO:GO:0005524GO:GO:0005886GO:GO:0016021Gramene:AT3G18810.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF55HOGENOM:HOG000116550InParanoid:Q9LS95
InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009
InterPro:IPR017441iPTMnet:Q9LS95KEGG:ath:AT3G18810OMA:HNCEAKV
PaxDb:Q9LS95Pfam:PF07714Pfam:Q9LS95Pfscan:PS50011
PhylomeDB:Q9LS95PRIDE:Q9LS95PRO:PR:Q9LS95PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9LS95Proteomes:UP000006548
RefSeq:NP_188511.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9LS95STRING:3702.AT3G18810.1SUPFAM:SSF56112TAIR:AT3G18810
TMHMM:TMhelixUniGene:At.53378UniProt:Q9LS95
Coordinates (TAIR10) chr3:-:6480701..6483593
Molecular Weight (calculated) 74691.00 Da
IEP (calculated) 6.06
GRAVY (calculated) -0.93
Length 700 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEGQSPENS PPSPTPPSPS SSDNQQQSSP PPSDSSSPSP PAPPPPDDSS NGSPQPPSSD SQSPPSPQGN NNNDGNNGNN NNDNNNNNNG NNNNDNNNGN
101: NKDNNNNGNN NNGNNNNGND NNGNNNNGNN NDNNNQNNGG GSNNRSPPPP SRNSDRNSPS PPRALAPPRS SGGGSNSSGN NEPNTAAIVG IVAGAGLLFL
201: VMILFCVCCC RKKKKKHQMP YYAGNGYATG KGDQYQQQQY NNQSDHVMNL SQQYPGSNGN NNWMNSPPPP PPGSWQPSPP PPPPPVSGGM NGNSSDFSSN
301: YSGPHGPSVP PPHPSVALGF NKSTFTYDEL AAATQGFSQS RLLGQGGFGY VHKGILPNGK EIAVKSLKAG SGQGEREFQA EVDIISRVHH RFLVSLVGYC
401: IAGGQRMLVY EFLPNDTLEF HLHGKSGKVL DWPTRLKIAL GSAKGLAYLH EDCHPRIIHR DIKASNILLD ESFEAKVADF GLAKLSQDNV THVSTRIMGT
501: FGYLAPEYAS SGKLTDRSDV FSFGVMLLEL VTGRRPVDLT GEMEDSLVDW ARPICLNAAQ DGDYSELVDP RLENQYEPHE MAQMVACAAA AVRHSARRRP
601: KMSQIVRALE GDATLDDLSE GGKAGQSSFL GRGSSSDYDS STYSADMKKF RKVALDSHEY GASSEYGNTS EYGLDPSSSS SEEIRRGGAN NNKTTPSRDH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)