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AT2G33320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.897
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calcium-dependent lipid-binding (CaLB domain) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G04540.1); Has 1158 Blast hits to 704 proteins in 125 species: Archae - 2; Bacteria - 40; Metazoa - 222; Fungi - 104; Plants - 382; Viruses - 4; Other Eukaryotes - 404 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJRPeggNOG:ENOG410YQG1EMBL:AC002332EMBL:CP002685
EnsemblPlants:AT2G33320EnsemblPlants:AT2G33320.1entrez:817895Gene3D:2.60.40.150
GeneID:817895Gramene:AT2G33320.1hmmpanther:PTHR32246hmmpanther:PTHR32246:SF16
HOGENOM:HOG000114072InterPro:IPR000008KEGG:ath:AT2G33320OMA:FRVSEDF
Pfam:PF00168PhylomeDB:O22783PIR:A84744Proteomes:UP000006548
RefSeq:NP_180890.1SMART:SM00239SMR:O22783SUPFAM:SSF49562
TAIR:AT2G33320UniGene:At.37943UniGene:At.68983UniProt:O22783
Coordinates (TAIR10) chr2:-:14119526..14121334
Molecular Weight (calculated) 66584.50 Da
IEP (calculated) 10.25
GRAVY (calculated) -0.69
Length 602 amino acids
Sequence (TAIR10)
(BLAST)
001: MSIFPSFQLL ELNIISAQDL APVSRKMKTY AVAWVHSERK LTTRVDYTGG GNPTWNDKFV FRVSEDFLYA DTSAVVVEIY ALHWFRDVHV GTVRVLISNL
101: IPPNRRPGYR SNEEYRRTPP PGMRFVALQV RRPSGRPQGI LNIGVGILDG SMRSMPLYTN MDSSAVGYRD LLGEEDPNLQ NLHLNSFKGS SKNPQSPSSK
201: QYQSVVSRPP MLRRTRSDTS SMVVSDLLSR VERSRVANRK PASALMSAES ETVPTTTGHD SVTSDSELTK SIEYALPYQS PKIPSQGYDS YEPDFIDQSP
301: NHNVLRPRSE RQHEPDFIDQ SPFRSNDRSR KTPRRSTPMI EKPRPPRDYD RTSSRASPYL SRHGTPLRSN IVASTPIRSN MVSSSPMRST GVGSTPRRSN
401: ILGSTPLRSN IVGSTPIRSN YKATPMKSPM QFGTPMRSNL AGRPVLTESE LGPSPSEVAQ KMAKERSQAY ETESSILSEW SLDDDSNIEG LRSKLERWRT
501: ELPPLYDLGS SHQSSDVGSG AMVVANVGGG KSSRKKTPAV KKKHNRRHTE GGGNGLFSCF SNLCGVECTF VCGGGSDQDG SKKKGGSGRL PRLGSADDLS
601: YL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)