AT2G33240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin XI D | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Myosin-like proteins | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
myosin XI D (XID); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: endomembrane system, myosin complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI A (TAIR:AT1G04600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14086942..14096914 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 200650.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.49 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1770 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVWKHQLIGF SGIFSNVSPA SVKVTVGSQV WVEDPDEAWL DGEVVEANGQ EIKVNCQTKT VVAKVNAVHP KDPEFPELGV DDMTKLAYLH EPGVLLNLKA 0101: RYNANEIYTY TGNILIAVNP FKRLPHLYGN EIMEQYKGTD FGELSPHPFA VADSAYRKMI NEGVSQAILV SGESGAGKTE STKMLMQYLA YMGGKAESEG 0201: RSVEQQVLES NPVLEAFGNA KTVRNNNSSR FGKFVEIQFN HMGRISGAAI RTYLLERSRV CQVSDPERNY HCFYMLCAAP EQETERYQLG KPSTFHYLNQ 0301: SNCHALDAID DSKEYLATRK AMDVVGISPE EQDAIFRVVA AILHLGNIEF AKSEESDGAE PKDDKSRFHL KVAAKLFMCD EKALENSLCN RVMVTRGESI 0401: TKPLDPGSAA LSRDALAKIV YSKLFDWLVT KINNSIGQDS SSKYIIGVLD IYGFESFKTN SFEQFCINLT NEKLQQHFNQ HVFKMEQEEY TKEEIDWSYI 0501: EFIDNQDVLD LIEKKPGGII ALLDEACMFP RSTHDTLAEK LYQTFGSHKR FTKPKLARTD FTICHYAGDV TYQTELFLDK NKDYVVGEHQ SLMNSSDCSF 0601: VSSLFPKSRE ESSKSSKFSS IGSQFKQQLQ SLLETLNTTE PHYIRCVKPN NVLKPEIFEN VNVLHQLRCG GVMEAIRISC AGYPTRKPFN EFLTRFRILA 0701: PEATERSFDE VDACKKLLAR VDLKGFQIGK TKVFLRAGQM AELDAHRAEV LGHSARIIQR KVITYLSRKK YLLLQSASTE IQAFCRGHIA RVQFKATRRE 0801: AASVRIQKQA RTYICQTAFK KLCASAISIQ SGLRAMAARV EFQYRTKRKA AIIIQSQIRR CLCRRRYLRT KKAAITTQCG WRVKVAHREL RKLKMAAKET 0901: GALQDAKTKL EKEVEELTSC LELEKQMRME LEQVKTQEVE DLRSALNDMK LQLGETQVTK SEEILKLQSA LQDMQLEFEE LAKELEMTND LAAENEQLKD 1001: LVSSLQRKID ESDSKYEETS KLSEERVKQE VPVIDQGVII KLEAENQKLK ALVSTLEKKI DSLDRKHDVT SSNISDQLKE SASSDYEMLS NLAAENERLK 1101: ALVSSLENEN YENDGNDSPN EQKEGPQMLK EEILAEDFSI DDEMTNKLAA ENKDLYDLVD LLERKIDETE KKYEEASKLC EERLKQVVDT EKKYEEASRL 1201: CEERLKQVVD TETKLIELKT SMQRLEEKVS DMEAEDKILR QQALRNSASR KMSPQKSLDL FVFMYLFQPV ENGHHESFAP IPSRRFGAMS FRRSQIEQQP 1301: HEFVDVLLKC VSKNVGFSHG KPVAAFTIYK CLIHWKLFEA EKTSVFDRIV PIFGSAIENP EDDSNLAYWL TNTSTLLFLL QRSLKSHSTT GASPKKPPQP 1401: TSFFGRMTQG FRSPSSASLS GDVVQQVDAR YPALLFKQQL TAYIETIYGI FQENVKRKLA PVLSSCIQGL KDSSHEFSAE TLSAESSEQN SPEKPSEENP 1501: PEKLSEDNSS GKLSEDYLAA KPSEDNSPAK PSEENSQAKL SEVNPQAKPS AENSLAKPSE ENSPTETWQD VIGLLNQLLG TLKKNYVPLF LAQKIFCQTF 1601: QDINVQLFNS LLQRECCTFI MGKKVNVWLN ELESWCSQAT EDFVGSSWDE LKNTRQALVL LVTEQKSTIT YDDLTTNLCP ALSTQQLYRI CTLCKIDDHE 1701: DQNVSPDVIS NLKLLVTDED EDSRSFLLDN NSSIPFAADE ISNSMQEKDF TNVKPAVELA DNPNFHFLKE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)