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AT2G32810.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta galactosidase 9
Curator
Summary (TAIR10)
putative beta-galactosidase
Computational
Description (TAIR10)
beta galactosidase 9 (BGAL9); FUNCTIONS IN: sugar binding, cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 8 (TAIR:AT2G28470.1); Has 2947 Blast hits to 2593 proteins in 491 species: Archae - 15; Bacteria - 1028; Metazoa - 963; Fungi - 209; Plants - 636; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G32810-MONOMERBioCyc:ARA:GQT-2715-MONOMERCAZy:GH35EC:3.2.1.23
eggNOG:COG1874eggNOG:KOG0496EMBL:AC003974EMBL:AJ270305
EMBL:CP002685EnsemblPlants:AT2G32810EnsemblPlants:AT2G32810.1entrez:817842
ExpressionAtlas:Q9SCV3Gene3D:2.60.120.260Gene3D:3.20.20.80GeneID:817842
Genevisible:Q9SCV3GO:GO:0004565GO:GO:0005773GO:GO:0005774
GO:GO:0005975GO:GO:0009505GO:GO:0030246GO:GO:0048046
hmmpanther:PTHR23421hmmpanther:PTHR23421:SF69HOGENOM:HOG000239919InParanoid:Q9SCV3
InterPro:IPR000922InterPro:IPR001944InterPro:IPR008979InterPro:IPR013781
InterPro:IPR017853InterPro:IPR019801InterPro:IPR031330KEGG:00052+3.2.1.23
KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23
OMA:GSKQEAHPANTHER:PTHR23421PaxDb:Q9SCV3Pfam:PF01301
Pfam:PF02140Pfam:Q9SCV3Pfscan:PS50228PhylomeDB:Q9SCV3
PIR:T00787PRIDE:Q9SCV3PRINTS:PR00742PRO:PR:Q9SCV3
PROSITE:PS01182PROSITE:PS50228ProteinModelPortal:Q9SCV3Proteomes:UP000006548
RefSeq:NP_565755.1scanprosite:PS01182SMR:Q9SCV3STRING:3702.AT2G32810.1
SUPFAM:SSF49785SUPFAM:SSF51445TAIR:AT2G32810tair10-symbols:BGAL9
TMHMM:TMhelixUniGene:At.66358UniGene:At.704UniProt:Q9SCV3
Coordinates (TAIR10) chr2:-:13919410..13925325
Molecular Weight (calculated) 99203.80 Da
IEP (calculated) 8.11
GRAVY (calculated) -0.32
Length 887 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESIRTFSL QWRILSLIIA LLVYFPILSG SYFKPFNVSY DHRALIIAGK RRMLVSAGIH YPRATPEMWS DLIAKSKEGG ADVVQTYVFW NGHEPVKGQY
101: NFEGRYDLVK FVKLIGSSGL YLHLRIGPYV CAEWNFGGFP VWLRDIPGIE FRTDNEPFKK EMQKFVTKIV DLMREAKLFC WQGGPIIMLQ IENEYGDVEK
201: SYGQKGKDYV KWAASMALGL GAGVPWVMCK QTDAPENIID ACNGYYCDGF KPNSRTKPVL WTEDWDGWYT KWGGSLPHRP AEDLAFAVAR FYQRGGSFQN
301: YYMYFGGTNF GRTSGGPFYI TSYDYDAPLD EYGLRSEPKW GHLKDLHAAI KLCEPALVAA DAPQYRKLGS KQEAHIYHGD GETGGKVCAA FLANIDEHKS
401: AHVKFNGQSY TLPPWSVSIL PDCRHVAFNT AKVGAQTSVK TVESARPSLG SMSILQKVVR QDNVSYISKS WMALKEPIGI WGENNFTFQG LLEHLNVTKD
501: RSDYLWHKTR ISVSEDDISF WKKNGPNSTV SIDSMRDVLR VFVNKQLAGS IVGHWVKAVQ PVRFIQGNND LLLLTQTVGL QNYGAFLEKD GAGFRGKAKL
601: TGFKNGDLDL SKSSWTYQVG LKGEADKIYT VEHNEKAEWS TLETDASPSI FMWYKTYFDP PAGTDPVVLN LESMGRGQAW VNGQHIGRYW NIISQKDGCD
701: RTCDYRGAYN SDKCTTNCGK PTQTRYHVPR SWLKPSSNLL VLFEETGGNP FKISVKTVTA GILCGQVSES HYPPLRKWST PDYINGTMSI NSVAPEVHLH
801: CEDGHVISSI EFASYGTPRG SCDGFSIGKC HASNSLSIVS EACKGRNSCF IEVSNTAFIS DPCSGTLKTL AVMSRCSPSQ NMSDLSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)