AT2G32530.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.768 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cellulose synthase-like B3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes a gene similar to cellulose synthase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cellulose synthase-like B3 (CSLB03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B4 (TAIR:AT2G32540.1); Has 2368 Blast hits to 2281 proteins in 468 species: Archae - 7; Bacteria - 755; Metazoa - 0; Fungi - 3; Plants - 1582; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:13809283..13813487 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 84893.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.26 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 755 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MADSSSSLPP LCEKISYKNY FLRVVDLTIL GFLFSLLLYR ILLMNQNNSV WVVAFLCESF FSFIWLLITS IKWSPASYKS YPERLDERVH DLPSVDMFVT 101: TADPVREPPI LVANTLLSLL AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNIKVRAP FRYFLNPPAA TESSEFSKDW EITKREYEKL 201: SRRVEDATGD SHWLDAEDDF EDFSNTKPND HSTIVKVVWE NKGGVGVENE VPHFVYISRE KRPNYLHHYK AGAMNFLVRV SGLMTNAPYM LNVDCDMYAN 301: EADVVRQAMC IFLQKSMNSN HCAFVQFPQE FYDSNADELT VLQSYLGRGI AGIQGPTYAG SGCFHTRRVM YGLSIDDLED DGSLSSLATR KYLAEENLAR 401: EFGNSNEMVT SVVEALQRKP NPQNTLANSL EAAQEVGHCH FEYQTSWGKT IGWLYESTAE DANTSIGIHS RGWTSSYISP KPPAFLGAMP PGGPEAMLQQ 501: RRWATGLLEV LFNKQSPLIG MFCRKIRFRQ SLAYLYIFTW GLRSIPELIY CLLPAYCLLH NAALFPKGVY LGIVVTLVGM HCLYSLWEFM SLGFSVQSWF 601: ASQSFWRIKT TCSWLFSIPD IILKLLGISK TVFIVTKKTM PKTMSGSGSE KSQREVDCPN QDSGKFEFDG SLYFLPGTFI LLVNLAALAG CSVGLQRHRG 701: GGSGLAEACG CILVVILFLP FLKGMFEKGK YGIPWSTLSK AAFLAVLFVV FSVGN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)