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AT2G32170.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.959
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: N2227-like (InterPro:IPR012901); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G32160.3); Has 531 Blast hits to 480 proteins in 200 species: Archae - 0; Bacteria - 4; Metazoa - 150; Fungi - 210; Plants - 66; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
Protein Annotations
EMBL:AY091048EMBL:AY133768EMBL:CP002685EnsemblPlants:AT2G32170
EnsemblPlants:AT2G32170.1entrez:817776ExpressionAtlas:Q8RWX2Gene3D:3.40.50.150
GeneID:817776GO:GO:0008168Gramene:AT2G32170.1hmmpanther:PTHR12303
hmmpanther:PTHR12303:SF6HOGENOM:HOG000204444InterPro:IPR012901InterPro:IPR029063
ncoils:CoilPfam:PF07942PhylomeDB:Q8RWX2ProMEX:Q8RWX2
Proteomes:UP000006548RefSeq:NP_850185.1SMART:SM01296SUPFAM:SSF53335
TAIR:AT2G32170UniGene:At.38114UniGene:At.71788UniProt:Q8RWX2
Coordinates (TAIR10) chr2:+:13666476..13670924
Molecular Weight (calculated) 57714.80 Da
IEP (calculated) 4.90
GRAVY (calculated) -0.52
Length 504 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSPSEMTET APAIMTTESE RIESSRELVD NEEEEKIRRQ KKLEEALEAK SLRRIISAYL NYPEASEEDL KRWERSYRKL SPAHKALVPH YPMKFQRLRR
101: CISANSYFIF NMLQAFEPPI DLSQELDGCE DSNLDCAPHE RYTLDERHDS SCQPALTNSC TYKEESKHIR DPITGVSIEE LQRKEAHDHS PKDDSADTRI
201: NDKTCDCHEG QLNHDHGSVS FSSHDWLDSS LQTHVPLVDV DKVRCIIRNI VRDWAAEGQR ERDQCYKPIL EELDSLFPDR LKESTPPACL VPGAGLGRLA
301: LEISCLGFIS QGNEFSYYMM ICSSFILNYT QVPGEWTIYP WIHSNCNSLS DNDQLRPIAI PDIHPASAGI TEGFSMCGGD FVEVYNESSH AGMWDAVVTC
401: FFIDTAHNVI EYIQTISKIL KDGGVWINLG PLLYHFADTY GHENEMSIEL SLEDVKRVAS HFGFVIEKER TIETTYTTNP RAMMQNRYYT AFWTMRKKCA
501: ITTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)