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AT2G32150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.787
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G02230.2); Has 2392 Blast hits to 2391 proteins in 515 species: Archae - 15; Bacteria - 775; Metazoa - 2; Fungi - 155; Plants - 196; Viruses - 0; Other Eukaryotes - 1249 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1011eggNOG:KOG3109EMBL:AC006223EMBL:AF370598
EMBL:AY057535EMBL:AY093978EMBL:CP002685EnsemblPlants:AT2G32150
EnsemblPlants:AT2G32150.1entrez:817774Gene3D:3.40.50.1000GeneID:817774
GO:GO:0016787Gramene:AT2G32150.1hmmpanther:PTHR12725hmmpanther:PTHR12725:SF81
HOGENOM:HOG000239954InterPro:IPR010237InterPro:IPR023214KEGG:ath:AT2G32150
OMA:FSPINCLPfam:PF13419PhylomeDB:Q9SKY5PIR:E84729
Proteomes:UP000006548RefSeq:NP_565738.1SMR:Q9SKY5STRING:3702.AT2G32150.1
SUPFAM:SSF56784TAIR:AT2G32150TIGRfam:TIGR01993TIGRFAMs:TIGR01993
UniGene:At.21600UniProt:Q9SKY5
Coordinates (TAIR10) chr2:+:13659095..13660531
Molecular Weight (calculated) 29037.90 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.16
Length 263 amino acids
Sequence (TAIR10)
(BLAST)
001: MDFSPINCLI FDLDDTLYPL KTGIAPAVKK NIDDFLVEKF GFSESKASSL RVELFKTYGS TLAGLRALGH DVHPDEYHSF VHGRLPYGSI EPNNKLRNLL
101: NKIKQRKIIF TNSDKNHAVK VLKKLGLEDC FEEMICFETM NPNLFGSTTR PDEYPVVLKP SLTAMDICIR VANVDPRRTV FLDDNIHNIT AGKSVGLRTI
201: LVGRAEKTKD ADYAVETVTE IATAVPEIWA TATATGGFDV GGERIRRSKS ELEGMASIAA VGA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)