AT2G31865.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.614 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : poly(ADP-ribose) glycohydrolase 2 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
poly(ADP-ribose) glycohydrolase 2 (PARG2); FUNCTIONS IN: poly(ADP-ribose) glycohydrolase activity; INVOLVED IN: defense response to fungus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) glycohydrolase (InterPro:IPR007724); BEST Arabidopsis thaliana protein match is: Poly (ADP-ribose) glycohydrolase (PARG) (TAIR:AT2G31870.2); Has 350 Blast hits to 327 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 176; Fungi - 8; Plants - 56; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13546790..13549472 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58945.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.48 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 522 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MELRADLRSI LQYLPLVAQS SSLVWPPSVE EELQTISRGP SESMVNSGEA LALHITNMRK SLSLNASDLA PYALQGYGLF FDKKISREES ANFFGEVVPA 101: LCRLLLQLPS MLEKHYQKAD HVLDGVKSGL RLLGPQEAGI VLLSQELIAA LLACSFFCLF PEVDRSLKNL QGINFSGLFS FPYMRHCTKQ ENKIKCLIHY 201: FGRICRWMPT GFVSFERKIL PLEYHPHFVS YPKADSWANS VTPLCSIEIH TSGAIEDQPC EALEVDFADE YFGGLTLSYD TLQEEIRFVI NPELIAGMIF 301: LPRMDANEAI EIVGVERFSG YTGYGPSFQY AGDYTDNKDL DIFRRRKTRV IAIDAMPDPG MGQYKLDALI REVNKAFSGY MHQCKYNIDV KHDPEASSSH 401: VPLTSDSASQ VIESSHRWCI DHEEKKIGVA TGNWGCGVFG GDPELKIMLQ WLAISQSGRP FMSYYTFGLQ ALQNLNQVIE MVALQEMTVG DLWKKLVEYS 501: SERLSRRTWL GFFSWLMTSL ST |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)