AT5G26920.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.807 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cam-binding protein 60-like G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a calmodulin-binding protein CBP60g (calmodulin binding protein 60-like.g). The calmodulin-binding domain is located near the N-terminus; calmodulin binding is dependent on Ca(2+). Inducible by both bacterial pathogen and MAMP (microbe-associated molecular pattern) treatments. Bacterial growth is enhanced in cbp60g mutants. cbp60g mutants also show defects in salicylic acid (SA) accumulation and SA signaling. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Cam-binding protein 60-like G (CBP60G); CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 271 Blast hits to 271 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 271; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:9475860..9478448 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63071.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.48 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 563 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKIRNSPSFH GGSGYSVFRA RNLTFKKVVK KVMRDQSNNQ FMIQMENMIR RIVREEIQRS LQPFLSSSCV SMERSRSETP SSRSRLKLCF INSPPSSIFT 101: GSKIEAEDGS PLVIELVDAT TNTLVSTGPF SSSRVELVPL NADFTEESWT VEGFNRNILT QREGKRPLLT GDLTVMLKNG VGVITGDIAF SDNSSWTRSR 201: KFRLGAKLTG DGAVEARSEA FGCRDQRGES YKKHHPPCPS DEVWRLEKIA KDGVSATRLA ERKILTVKDF RRLYTVNRNE LHNIIGAGVS KKTWNTIVSH 301: AMDCVLDETE CYIYNANTPG VTLLFNSVYE LIRVSFNGND IQNLDQPILD QLKAEAYQNL NRITAVNDRT FVGHPQRSLQ CPQDPGFVVT CSGSQHIDFQ 401: GSLDPSSSSM ALCHKASSST VHPDVLMSFD NSSTARFHID KKFLPTFGNS FKVSELDQVH GKSQTVVTKG CIENNEEDEN AFSYHHHDDM TSSWSPGTHQ 501: AVETMFLTVS ETEEAGMFDV HFANVNLGSP RARWCKVKAA FKVRAAFKEV RRHTTARNPR EGL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)