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AT2G30350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.368
endoplasmic reticulum 0.248
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Excinuclease ABC, C subunit, N-terminal
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Excinuclease ABC, C subunit, N-terminal; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG411266CeggNOG:KOG3005EMBL:CP002685EnsemblPlants:AT2G30350
EnsemblPlants:AT2G30350.1entrez:817585ExpressionAtlas:F4IMS7GeneID:817585
Gramene:AT2G30350.1hmmpanther:PTHR20208hmmpanther:PTHR20208:SF10OMA:ENENEDC
PaxDb:F4IMS7PRIDE:F4IMS7ProteinModelPortal:F4IMS7Proteomes:UP000006548
RefSeq:NP_850142.2SMR:F4IMS7STRING:3702.AT2G30350.2TAIR:AT2G30350
UniGene:At.12243UniProt:F4IMS7
Coordinates (TAIR10) chr2:-:12934237..12935325
Molecular Weight (calculated) 37429.70 Da
IEP (calculated) 4.42
GRAVY (calculated) -0.42
Length 334 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNGSLYLWF PHQCLCPSGP FATLKQKIPC QKILFLLLLF SSCGLALECF ANVKKTFLQF EWAWQHPRES VAVREAAAAF KSFSGVASKI KLVYTMLNLP
101: AWNSLNLTVN YFSSKYAHHG GKSPSLPLHM KVQVCAMEDL QYFTKVDDSS QPEDEESPEV NEEDDDDDDD DSSNLSQPGN SNTSSSDDRH FEKAKEPVTV
201: FDEEDRLANF SGFGLLDEEE TVEDEVSHIT VGSIRATEKE PETVFNDRLA SFTCFGLVEI VEDEVSHGTI GSTEAMEKEC RKRRNHITST TTEVDVEVID
301: LMTPSPSCRA GSSMKRRRVS EFIDLTMSPN FIES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)