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AT2G29440.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.973
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase tau 6
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase tau 6 (GSTU6); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase tau 5 (TAIR:AT2G29450.1); Has 8102 Blast hits to 8085 proteins in 1224 species: Archae - 0; Bacteria - 4301; Metazoa - 845; Fungi - 139; Plants - 2030; Viruses - 0; Other Eukaryotes - 787 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G29440-MONOMEREC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406
EMBL:AC004561EMBL:AF288187EMBL:AK229012EMBL:BT024843
EMBL:CP002685EnsemblPlants:AT2G29440EnsemblPlants:AT2G29440.1entrez:817493
Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:817493Genevisible:Q9ZW26
GO:GO:0004364GO:GO:0005737GO:GO:0005829GO:GO:0006749
GO:GO:0009407GO:GO:0009636Gramene:AT2G29440.1hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF303HOGENOM:HOG000125749InParanoid:Q9ZW26InterPro:IPR004045
InterPro:IPR010987InterPro:IPR012336iPTMnet:Q9ZW26KEGG:ath:AT2G29440
KO:K00799OMA:CLERAWEPaxDb:Q9ZW26Pfam:PF13410
Pfam:PF13417Pfam:Q9ZW26Pfscan:PS50404Pfscan:PS50405
PhylomeDB:Q9ZW26PIR:D84696PRIDE:Q9ZW26PRO:PR:Q9ZW26
PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9ZW26Proteomes:UP000006548
RefSeq:NP_180505.1SMR:Q9ZW26STRING:3702.AT2G29440.1SUPFAM:SSF47616
SUPFAM:SSF52833TAIR:AT2G29440tair10-symbols:ATGSTU6tair10-symbols:GST24
tair10-symbols:GSTU6UniGene:At.12687UniProt:Q9ZW26
Coordinates (TAIR10) chr2:-:12620159..12621099
Molecular Weight (calculated) 25619.60 Da
IEP (calculated) 7.60
GRAVY (calculated) -0.21
Length 223 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKNEEVKLL GIWASPFSRR IEMALKLKGV PYEYLEEDLE NKSSLLLALS PIHKKIPVLV HNGKTIIESH VILEYIDETW KHNPILPQDP FQRSKARVLA
101: KLVDEKIVNV GFASLAKTEK GREVLIEQTR ELIMCLEKEL AGKDYFGGKT VGFLDFVAGS MIPFCLERAW EGMGVEMITE KKFPEYNKWV KKLKEVEIVV
201: DCIPLREKHI EHMNNMAEKI RSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)