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AT2G29170.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.606
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EC:1.1.1.-EMBL:AC004561EMBL:CP002685EnsemblPlants:AT2G29170
EnsemblPlants:AT2G29170.1entrez:817466Gene3D:3.40.50.720GeneID:817466
GO:GO:0016491Gramene:AT2G29170.1hmmpanther:PTHR24322hmmpanther:PTHR24322:SF354
InParanoid:F4IJR7InterPro:IPR002347InterPro:IPR016040InterPro:IPR020904
KEGG:ath:AT2G29170PANTHER:PTHR24322Pfam:PF00106PIR:C84693
PRINTS:PR00080PRINTS:PR00081PRO:PR:Q9ZW04PROSITE:PS00061
ProteinModelPortal:Q9ZW04Proteomes:UP000006548RefSeq:NP_180480.2SMR:Q9ZW04
SUPFAM:SSF51735TAIR:AT2G29170UniGene:At.52965UniProt:F4IJR7
Coordinates (TAIR10) chr2:-:12541864..12542280
Molecular Weight (calculated) 11760.20 Da
IEP (calculated) 7.09
GRAVY (calculated) -0.16
Length 107 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKAEENLRD KCRWSLGGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR NETQLQECVR EWQAKGFEVT TSVCDVSSRD QREKLMENVA SIFQGKLNIL
101: VSLCIRA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)