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AT2G28930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein kinase 1B
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
protein kinase 1B (PK1B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G07570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:BT029755EMBL:CP002685
EnsemblPlants:AT2G28930EnsemblPlants:AT2G28930.1entrez:817442ExpressionAtlas:A1L4W8
GeneID:817442GO:GO:0004674GO:GO:0005524GO:GO:0005886
Gramene:AT2G28930.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF191InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
OMA:SPKYMSSPfam:PF07714Pfscan:PS50011PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_180459.2
scanprosite:PS00107scanprosite:PS00108SMR:A1L4W8STRING:3702.AT2G28930.1
SUPFAM:SSF56112TAIR:AT2G28930tair10-symbols:APK1Btair10-symbols:PK1B
UniGene:At.46050UniProt:A1L4W8
Coordinates (TAIR10) chr2:+:12424957..12426565
Molecular Weight (calculated) 47222.60 Da
IEP (calculated) 9.69
GRAVY (calculated) -0.31
Length 423 amino acids
Sequence (TAIR10)
(BLAST)
001: MKMGFVEKVK SNVFLYANYV FGCCIGASPK YMSSEANDSL GSKSSSVSIR TNPRTEGEIL QSPNLKSFTF AELKAATRNF RPDSVLGEGG FGSVFKGWID
101: EQTLTASKPG TGVVIAVKKL NQDGWQGHQE WLAEVNYLGQ FSHPNLVKLI GYCLEDEHRL LVYEFMPRGS LENHLFRRGS YFQPLSWTLR LKVALGAAKG
201: LAFLHNAETS VIYRDFKTSN ILLDSEYNAK LSDFGLAKDG PTGDKSHVST RIMGTYGYAA PEYLATGHLT TKSDVYSYGV VLLEVLSGRR AVDKNRPPGE
301: QKLVEWARPL LANKRKLFRV IDNRLQDQYS MEEACKVATL ALRCLTFEIK LRPNMNEVVS HLEHIQTLNE AGGRNIDMVQ RRMRRRSDSV AINQKPNAGF
401: ARQTAVGVIA TAYPRPSDSP LFV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)