AT2G26360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.880 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mitochondrial substrate carrier family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: mitochondrial substrate carrier family protein (TAIR:AT2G35800.1); Has 17043 Blast hits to 12636 proteins in 416 species: Archae - 0; Bacteria - 6; Metazoa - 6988; Fungi - 5263; Plants - 3119; Viruses - 0; Other Eukaryotes - 1667 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:11221603..11223160 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41934.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.90 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.16 | ||||||||||||||||||||||||||||||||||||
| Length | 387 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKNRVSFQGL STDPLKSTMV NKAPKRKHVS PESLLLSILN DLLFLNSQKL DSCFRRKSNS DACSFIVSLN FAKVGNFTSR SNEIAPLINE AVAKGKNFDT 101: GTRVGLDVGH LLKSALAGGI SCAFSAFLMH PVDTVKTQVQ ASTTLSFLEI LSKIPEIGAR GLYKGSIPAV VGQFASHGLR TSIYEASKLA LPLVAPTLLD 201: IQVQSIASFI GTVLGTTLRI PCEVLKQRLQ ANQFDNIVEA TVSTWHQEGL KGLFRGTGVT LLREVPFYVA GMGLYNQSKK VVERQLGREL EPWEAIAVGA 301: LSGGFTAVLT TPFDVIKTRM MTAPQGVELS MLMAAYSILT HEGPLAFYKG AVPRFFWTAP LGALNLAGYE LLQKAMITPL NQSVHSE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)