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AT2G26140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FTSH protease 4
Curator
Summary (TAIR10)
encodes an FtsH protease that is localized to the mitochondrion
Computational
Description (TAIR10)
FTSH protease 4 (ftsh4); FUNCTIONS IN: metallopeptidase activity, ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase S16, Lon protease, C-terminal (InterPro:IPR001984); BEST Arabidopsis thaliana protein match is: FTSH protease 11 (TAIR:AT5G53170.1); Has 39775 Blast hits to 37259 proteins in 3240 species: Archae - 1584; Bacteria - 15744; Metazoa - 5149; Fungi - 3764; Plants - 3335; Viruses - 40; Other Eukaryotes - 10159 (source: NCBI BLink).
Protein Annotations
BioGrid:2506BRENDA:3.4.24.B20EC:3.4.24.-eggNOG:COG0465
eggNOG:KOG0734EMBL:AC004747EMBL:AK220842EMBL:CP002685
EnsemblPlants:AT2G26140EnsemblPlants:AT2G26140.1entrez:817154Gene3D:3.40.50.300
GeneID:817154Genevisible:O80983GO:GO:0004176GO:GO:0004222
GO:GO:0005524GO:GO:0005739GO:GO:0005743GO:GO:0006508
GO:GO:0008237GO:GO:0009536GO:GO:0016020GO:GO:0016021
GO:GO:0046872Gramene:AT2G26140.1HAMAP:MF_01458hmmpanther:PTHR23076
hmmpanther:PTHR23076:SF73HOGENOM:HOG000217276InParanoid:O80983InterPro:IPR000642
InterPro:IPR003593InterPro:IPR003959InterPro:IPR003960InterPro:IPR005936
InterPro:IPR027417KEGG:ath:AT2G26140merops:M41.004OMA:AYAICNE
PaxDb:O80983Pfam:O80983Pfam:PF00004Pfam:PF01434
PhylomeDB:O80983PIR:T02610PRIDE:O80983PRO:PR:O80983
PROSITE:PS00674ProteinModelPortal:O80983Proteomes:UP000006548RefSeq:NP_565616.1
scanprosite:PS00674SMART:SM00382SMR:O80983STRING:3702.AT2G26140.1
SUPFAM:SSF140990SUPFAM:SSF52540SwissPalm:O80983TAIR:AT2G26140
tair10-symbols:ftsh4TIGRfam:TIGR01241TIGRFAMs:TIGR01241UniGene:At.23415
UniProt:O80983
Coordinates (TAIR10) chr2:-:11131939..11135126
Molecular Weight (calculated) 77279.10 Da
IEP (calculated) 9.00
GRAVY (calculated) -0.17
Length 717 amino acids
Sequence (TAIR10)
(BLAST)
001: MAWRRIITKV SSHERELSSL RSLLVRAYSS FPRVGVTGAV GGGGASLPRT RFQSSYVGSF ARRVRDREEV NEVAHLRELI RRNDPEAVIR MFESQPSLHA
101: NASALSEYIK ALVKVDRLDQ SELVRTLQRG IAGVAREEET FGGLGAFRNV GKPTKDGVLG TASAPIHTIS TERTHFKEQL WSTIRTIGVG FLLISGIGAL
201: IEDRGIGKGL GLHEEVQPSM DSSTKFSDVK GVDEAKAELE EIVHYLRDPK RFTRLGGKLP KGVLLVGPPG TGKTMLARAI AGEAGVPFFS CSGSEFEEMF
301: VGVGARRVRD LFSAAKKCSP CIIFIDEIDA IGGSRNPKDQ QYMKMTLNQM LVELDGFKQN EGIIVVAATN FPESLDKALV RPGRFDRHIV VPNPDVEGRR
401: QILESHMSKV LKAEDVDLMI IARGTPGFSG ADLANLVNVA ALKAAMDGSK DVTMSDLEFA KDRIMMGSER KSAVISDESR KLTAFHEGGH ALVAIHTEGA
501: LPVHKATIVP RGMALGMVSQ LPDKDETSIS RKQMLARLDV CMGGRVAEEL IFGESEVTSG ASSDLEQATK LARAMVTKFG MSKEVGLVAH NYDDNGKSMS
601: TETRLLIESE VKQLLEKAYN NAKTILTVYN KELHALANAL LQHETLSGKQ IKELLTDLNS PLLQKRQEVV TKQSNPVPPS TPSSASSAAA AAAAAAAAAA
701: AAAATAATKG KDMAPVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)