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AT2G25510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28818374 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC006300EMBL:CP002685EnsemblPlants:AT2G25510EnsemblPlants:AT2G25510.1
entrez:817089ExpressionAtlas:Q8S8H2GeneID:817089GO:GO:0016021
Gramene:AT2G25510.1Proteomes:UP000006548RefSeq:NP_565599.1STRING:3702.AT2G25510.1
TAIR:AT2G25510TMHMM:TMhelixUniGene:At.27022UniProt:Q8S8H2
Coordinates (TAIR10) chr2:+:10856772..10857083
Molecular Weight (calculated) 11871.10 Da
IEP (calculated) 9.71
GRAVY (calculated) 0.78
Length 103 amino acids
Sequence (TAIR10)
(BLAST)
001: MMHALLFLLS QNIFLRLYAL RQKIRLFRNV FEKAHVVVFI YLLLRPRGLS KAQTNLVIDL NLASNACVCA CFLHCGLVCG FCLCLPMHVF VIFYSLSNGR
101: YNK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)