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AT2G23180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.957
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 96, subfamily A, polypeptide 1
Curator
Summary (TAIR10)
member of CYP96A
Computational
Description (TAIR10)
cytochrome P450, family 96, subfamily A, polypeptide 1 (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-380-MONOMEReggNOG:COG2124eggNOG:KOG0157EMBL:AC002391
EMBL:AF370589EMBL:AK117717EMBL:CP002685EnsemblPlants:AT2G23180
EnsemblPlants:AT2G23180.1entrez:816850Gene3D:1.10.630.10GeneID:816850
GO:GO:0004497GO:GO:0005506GO:GO:0016021GO:GO:0016705
GO:GO:0020037Gramene:AT2G23180.1hmmpanther:PTHR24296hmmpanther:PTHR24296:SF1
HOGENOM:HOG000237580InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT2G23180OMA:CFGGLDMPfam:PF00067PhylomeDB:O22189
PIR:T00514PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086
Proteomes:UP000006548RefSeq:NP_179899.1scanprosite:PS00086SMR:O22189
STRING:3702.AT2G23180.1SUPFAM:SSF48264TAIR:AT2G23180tair10-symbols:CYP96A1
TMHMM:TMhelixUniGene:At.12328UniProt:O22189
Coordinates (TAIR10) chr2:+:9874953..9876503
Molecular Weight (calculated) 58863.80 Da
IEP (calculated) 8.73
GRAVY (calculated) -0.06
Length 516 amino acids
Sequence (TAIR10)
(BLAST)
001: MALITLLEVS ISLLFFSFLY GYFLISKKPH RSFLTNWPFL GMLPGLLVEI PRVYDFVTEL LEASNLTYPF KGPCFGGLDM LITVDPANIH HIMSSNFANY
101: PKGTEFKKIF DVLGDGIFNA DSELWKDLRK SAQSMMTHQD FQRFTLRTIM SKLEKGLVPL LDYVAEKKQV VDLQDVFQRF TFDTSFVLAT GVDPGCLSTE
201: MPQIEFARAL DEAEEAIFFR HVKPEIVWKM QRFIGFGDEL KMKKAHSTFD RVCSKCIASK RDEITNGVIN IDSSSKDLLM CYMNVDTICH TTKYKLLNPS
301: DDKFLRDMIL SFMLAGRDTT SSALTWFFWL LSKNPKAITK IRQEINTQLS PRTNDFDSFN AQELNKLVYV HGALCEALRL YPPVPFQHKS PTKSDVLPSG
401: HRVDASSKIV FCLYSLGRMK SVWGEDASEF KPERWISESG RLIHVPSFKF LSFNAGPRTC LGKEVAMTQM KTVAVKIIQN YEIKVVEGHK IEPVPSIILH
501: MKHGLKVTVT KRSNLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)