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AT2G22860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phytosulfokine 2 precursor
Curator
Summary (TAIR10)
Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor.
Computational
Description (TAIR10)
phytosulfokine 2 precursor (PSK2); FUNCTIONS IN: growth factor activity; INVOLVED IN: cell proliferation, cell differentiation, organ morphogenesis; LOCATED IN: extracellular matrix; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Phytosulfokine (InterPro:IPR009438); BEST Arabidopsis thaliana protein match is: phytosulfokine 6 precursor (TAIR:AT4G37720.1); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J2W4eggNOG:ENOG410ZAZREMBL:AB029344EMBL:AB052752
EMBL:AC004786EMBL:AK118870EMBL:BK000108EMBL:BT004954
EMBL:CP002685EnsemblPlants:AT2G22860EnsemblPlants:AT2G22860.1entrez:816817
GeneID:816817Genevisible:O81003GO:GO:0005576GO:GO:0008283
GO:GO:0009887GO:GO:0030154GO:GO:0031012Gramene:AT2G22860.1
hmmpanther:PTHR33285hmmpanther:PTHR33285:SF3HOGENOM:HOG000239882InParanoid:O81003
InterPro:IPR009438KEGG:ath:AT2G22860OMA:DEDCLMRPaxDb:O81003
Pfam:O81003Pfam:PF06404PhylomeDB:O81003PIR:G84617
PRIDE:O81003PRO:PR:O81003Proteomes:UP000006548RefSeq:NP_179871.1
STRING:3702.AT2G22860.1TAIR:AT2G22860tair10-symbols:ATPSK2tair10-symbols:PSK2
UniGene:At.27061UniGene:At.70262UniProt:O81003
Coordinates (TAIR10) chr2:+:9737666..9738077
Molecular Weight (calculated) 9627.75 Da
IEP (calculated) 5.04
GRAVY (calculated) -0.12
Length 87 amino acids
Sequence (TAIR10)
(BLAST)
1: MANVSALLTI ALLLCSTLMC TARPEPAISI SITTAADPCN MEKKIEGKLD DMHMVDENCG ADDEDCLMRR TLVAHTDYIY TQKKKHP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)