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AT2G22190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.920
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT4G39770.1); Has 2386 Blast hits to 2380 proteins in 842 species: Archae - 41; Bacteria - 1358; Metazoa - 220; Fungi - 153; Plants - 485; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Protein Annotations
BioGrid:2106DNASU:816753EC:3.1.3.12eggNOG:COG1877
eggNOG:ENOG410IMM9EMBL:AC007168EMBL:AK176920EMBL:BT010648
EMBL:CP002685EnsemblPlants:AT2G22190EnsemblPlants:AT2G22190.1entrez:816753
Gene3D:3.40.50.1000GeneID:816753Genevisible:Q67X99GO:GO:0004805
GO:GO:0005992GO:GO:0009507GO:GO:0016311Gramene:AT2G22190.1
gramene_pathway:3.1.3.12gramene_pathway:TRESYN-PWYhmmpanther:PTHR10788hmmpanther:PTHR10788:SF19
HOGENOM:HOG000239289InParanoid:Q67X99IntAct:Q67X99InterPro:IPR003337
InterPro:IPR006379InterPro:IPR023214KEGG:ath:AT2G22190KO:K01087
OMA:WIKEHPSPaxDb:Q67X99Pfam:PF02358Pfam:Q67X99
PhylomeDB:Q67X99PIR:A84610PRIDE:Q67X99PRO:PR:Q67X99
ProteinModelPortal:Q67X99Proteomes:UP000006548RefSeq:NP_179809.2SMR:Q67X99
STRING:3702.AT2G22190.1SUPFAM:SSF56784TAIR:AT2G22190tair10-symbols:TPPE
TIGRfam:TIGR00685TIGRfam:TIGR01484TIGRFAMs:TIGR00685TIGRFAMs:TIGR01484
UniGene:At.39469UniPathway:UPA00299UniProt:Q67X99
Coordinates (TAIR10) chr2:-:9433897..9436482
Molecular Weight (calculated) 40253.40 Da
IEP (calculated) 8.13
GRAVY (calculated) -0.44
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MVRFIEENIT KMLETKAISN SEVLYVGGDD GDTSPTTKVL HDFQINSGGG LIRSWVDSMR ACSPTRPKSF NSQSCWIKEH PSALNMFEEI LHKSEGKQIV
101: MFLDYDGTLS PIVDDPDRAF MSKKMRNTVR KLAKCFPTAI VSGRCREKVS SFVKLTELYY AGSHGMDIKG PEQGSKYKKE NQSLLCQPAT EFLPVINEVY
201: KKLVENTQSI PGAKVENNKF CASVHFRCVE ENKWSDLAHQ VRSVLKNYPK LMLTQGRKVL EIRPIIKWDK GKALEFLLES LGYDNCTDVF PIYIGDDRTD
301: EDAFKILRDK KQGLGILVSK YAKETNASYS LQEPDEVMVF LERLVEWKQS RCGA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)