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AT2G20700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : LORELEI-LIKE-GPI ANCHORED PROTEIN 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (LLG2); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (TAIR:AT4G28280.2); Has 124 Blast hits to 124 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZRFeggNOG:ENOG410YIWKEMBL:BT012124EMBL:BT012380
EMBL:CP002685EnsemblPlants:AT2G20700EnsemblPlants:AT2G20700.1entrez:816598
GeneID:816598GO:GO:0031225GO:GO:0090406Gramene:AT2G20700.1
hmmpanther:PTHR31533hmmpanther:PTHR31533:SF2HOGENOM:HOG000239434KEGG:ath:AT2G20700
OMA:CKEDFANPhylomeDB:Q6NLF4Proteomes:UP000006548RefSeq:NP_179662.2
STRING:3702.AT2G20700.1TAIR:AT2G20700tair10-symbols:LLG2UniGene:At.27578
UniGene:At.39657UniProt:Q6NLF4
Coordinates (TAIR10) chr2:-:8925003..8925714
Molecular Weight (calculated) 17778.20 Da
IEP (calculated) 4.64
GRAVY (calculated) 0.12
Length 163 amino acids
Sequence (TAIR10)
(BLAST)
001: MEISPYCLLS LLPIFLLSGF SLSYDEFDGH AATSRALLQT RTTCKEDFAN KNYTIITSRC KGPNYPANVC CSAFKDFACP FAEVLNDEKN DCASTMFSYI
101: NLYGRYPPGI FANMCKEGKE GLDCTDVTQS ASATSDSIPR ASTTASLAVL STFLVLCLLF LSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)