AT2G17770.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : basic region/leucine zipper motif 27 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT. | ||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1); Has 164 Blast hits to 164 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:7723103..7723573 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 17476.70 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.20 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||||||
Length | 156 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR 101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQECVS PHSSTF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)