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AT2G17770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : basic region/leucine zipper motif 27
Curator
Summary (TAIR10)
Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.
Computational
Description (TAIR10)
basic region/leucine zipper motif 27 (BZIP27); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G35900.1); Has 164 Blast hits to 164 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:BN000022EMBL:BT029328EMBL:CP002685EnsemblPlants:AT2G17770
EnsemblPlants:AT2G17770.1EnsemblPlants:AT2G17770.2entrez:816286GeneID:816286
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0043565
GO:GO:0043621GO:GO:2000028Gramene:AT2G17770.1Gramene:AT2G17770.2
hmmpanther:PTHR22952hmmpanther:PTHR22952:SF95HOGENOM:HOG000234935IntAct:Q7PCC6
InterPro:IPR004827KEGG:ath:AT2G17770PaxDb:Q7PCC6Pfam:PF00170
PROSITE:PS00036PROSITE:PS50217ProteinModelPortal:Q7PCC6Proteomes:UP000006548
RefSeq:NP_001189545.1RefSeq:NP_179368.1scanprosite:PS00036SMART:SM00338
STRING:3702.AT2G17770.2SUPFAM:SSF57959TAIR:AT2G17770tair10-symbols:ATBZIP27
tair10-symbols:BZIP27tair10-symbols:FDPUniGene:At.52787UniProt:A0JPV8
Coordinates (TAIR10) chr2:+:7723103..7723573
Molecular Weight (calculated) 17476.70 Da
IEP (calculated) 9.20
GRAVY (calculated) -0.78
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQECVS PHSSTF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)