AT2G17650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : AMP-dependent synthetase and ligase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl activating enzyme 1 (TAIR:AT1G20560.1); Has 73858 Blast hits to 68450 proteins in 3463 species: Archae - 1190; Bacteria - 48268; Metazoa - 3206; Fungi - 2755; Plants - 2089; Viruses - 1; Other Eukaryotes - 16349 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:7671041..7672936 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 67466.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.22 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 603 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRFLLTKRAF RIFNPRFQRL WLTSSPFSST SNSGGFPDDS EPESWRTIEG LLRSPANFSP LSPITFLERS AKVYRDRTSL VFGSVKHTWF QTYQRCLRLA 101: SALTNLGISR GDVVAALAPN VPAMHELHFA VPMAGLILCP LNTRLDPSTL SVLLAHSEAK ILFVDHQLLE IAHGALDLLA KSDKTRKSLK LVLISQSNDD 201: DDSDEDSSST FASKYSFDYE YETLLKSGDS EFEIIKPRCE WDPISINYTS GTTSRPKGVV YSHRGAYLNS LATVFLHQMS VYPVYLWTVP MFHCNGWCLV 301: WGVAAQGGTN ICLRKVSPKM IFKNIAMHKV THMGGAPTVL NMIVNYTVTE HKPLPHRVEI MTGGSPPLPQ ILAKMEELGF NVSHLYGLTE TYGPGTHCVW 401: KPEWDSLSLE ERTKLKARQG VQHLGLEGLD VKDPLTMETV PDDGLTMGEV MFRGNTVMSG YFKDIEATRK AFEGDWFHSG DLAVKYPDGY IEIKDRLKDV 501: IISGGENISS VEVERVLCSH QAVLEAAVVA RPDHHWGQTP CGFVKLKEGF DTIKPEEIIG FCRDHLPHYM APKTIVFGDI PKTSTGKVQK YLLRKKADEM 601: GSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)