AT2G07739.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ycf1 protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ycf1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATMG00370.1); Has 1145 Blast hits to 1145 proteins in 726 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:3495511..3496110 | ||||||||
| Molecular Weight (calculated) | 23238.30 Da | ||||||||
| IEP (calculated) | 9.74 | ||||||||
| GRAVY (calculated) | 0.68 | ||||||||
| Length | 199 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MVFQSFILGN LVYLCMKIIN SVVVVGLYYG FLTTFSIGPF YLFLLRARVM DEGEEGTEKK VSATTGFIAG QLMMFISIYY APLHLALGRP HTITVLALPY 101: LLFHFFFWNN HKHFFDYGST TRNEMRNLRI QCVFPNNLIF KLFNHLILPS SMLARLVNIY MFRCNNKMLF VTSSFVVCVR MLLVEWAFPL FQLFLVMKV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)