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AT2G03340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : WRKY DNA-binding protein 3
Curator
Summary (TAIR10)
Encodes WRKY DNA-binding protein 3 (WRKY3).
Computational
Description (TAIR10)
WRKY DNA-binding protein 3 (WRKY3); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 6486 Blast hits to 3819 proteins in 292 species: Archae - 2; Bacteria - 20; Metazoa - 337; Fungi - 90; Plants - 5675; Viruses - 3; Other Eukaryotes - 359 (source: NCBI BLink).
Protein Annotations
BioGrid:265eggNOG:ENOG410IDX2eggNOG:ENOG410YBRTEMBL:AC006284
EMBL:AF224701EMBL:CP002685EnsemblPlants:AT2G03340EnsemblPlants:AT2G03340.1
entrez:814863ExpressionAtlas:Q9ZQ70Gene3D:2.20.25.80GeneID:814863
Genevisible:Q9ZQ70GO:GO:0003700GO:GO:0005634GO:GO:0006351
GO:GO:0043565Gramene:AT2G03340.1hmmpanther:PTHR31221hmmpanther:PTHR31221:SF22
HOGENOM:HOG000242409InParanoid:Q9ZQ70InterPro:IPR003657KEGG:ath:AT2G03340
OMA:NHELPQKPaxDb:Q9ZQ70Pfam:PF03106Pfam:Q9ZQ70
Pfscan:PS50811PhylomeDB:Q9ZQ70PIR:C84447PRIDE:Q9ZQ70
PRO:PR:Q9ZQ70PROSITE:PS50811ProteinModelPortal:Q9ZQ70Proteomes:UP000006548
RefSeq:NP_178433.1SMART:SM00774SMR:Q9ZQ70STRING:3702.AT2G03340.1
SUPFAM:0050605SUPFAM:SSF118290TAIR:AT2G03340tair10-symbols:WRKY3
UniGene:At.23587UniProt:Q0WPM8UniProt:Q9ZQ70
Coordinates (TAIR10) chr2:-:1014724..1016936
Molecular Weight (calculated) 56287.10 Da
IEP (calculated) 8.23
GRAVY (calculated) -0.87
Length 513 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)