AT2G03240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.650 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : EXS (ERD1/XPR1/SYG1) family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1164 Blast hits to 1104 proteins in 198 species: Archae - 0; Bacteria - 4; Metazoa - 278; Fungi - 369; Plants - 375; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:973693..977337 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 95058.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.00 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 823 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKFGKEFSSQ MVPEWHEAYM DYDYLKSQLK EIIKFKRKTN PHGPHHHHHH LLHRKMTLHR AFSGLISTSP KKKKHHGHGG GHGGGHQIGH FSDSDDDIEE 101: GIKHVTAPIL INSASHGYET TFLMASEEGG EYETVFFRRL DDEFNKVEKF YKEKVEEVMK EAVMLEKQMD ALIAFRVKVE HPDGWPWEER TVEMTQLASD 201: VANSAAAVAA STPAGARSMK VGAQAHMEAI QEGGSSKAGK SSDEEDDDDA EKEEDNGVSG EVSGDVRKMK AGRPPPIEVL DRVKFNHTKE TPRSTIKSVL 301: QASNLTELKF SRENLRKVEA KLRRAFVEFY QKLRLLKSYS FLNELAFSKI LKKYDKITSR HASKSYMKMI DNSYLGSSDE VTRLVERVEA TFIKHFSNAN 401: RSKGMNILRP KAKRERHRIT FSTGFLGGCL FSLVVALFAI IRTRNILQEE GQKQYMNTMF PLYSLFGFVV LHILMYAGNI YYWRRYRVNY SFIFGFKHGT 501: ELGYRQVLFV GLSIGVFALL CILANLDMEV DPETKDYQAL TELLPLFLLT GMFVVLVLPF NIFYRSSRFF FLTCLFHCLA APLYKVTLPD FLVGDQLTSQ 601: VQALRSIQFY ICHYGWGDYK HRINTCTESD AYNAFLFIVA VIPYVSRLLQ CLRRLFEEKN PEQGYNGLKY FLTIVAVCLR TTYSVDEDNQ FIWRILAGIF 701: SAIAAIFCTY WDLVYDWGLL NRTSKNPWLR DKLLVPQKKV YFIAMILNIL LRFAWLQTVL DFNFSFMHRQ TMVAVVASLE IIRRGIWNFF RLENEHLNNV 801: GKYRAFKTVP LPFNYDEDDD KGN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)