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AT2G02760.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ubiquiting-conjugating enzyme 2
Curator
Summary (TAIR10)
ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.
Computational
Description (TAIR10)
ubiquiting-conjugating enzyme 2 (UBC2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 1 (TAIR:AT1G14400.2); Has 10642 Blast hits to 10588 proteins in 402 species: Archae - 0; Bacteria - 2; Metazoa - 4556; Fungi - 2331; Plants - 2015; Viruses - 26; Other Eukaryotes - 1712 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G02760-MONOMERBioGrid:207BRENDA:2.3.2.B5EC:2.3.2.23
eggNOG:COG5078eggNOG:KOG0419EMBL:AC002521EMBL:AF370558
EMBL:AY072479EMBL:CP002685EMBL:DQ027017EMBL:L19353
EMBL:Y13031EnsemblPlants:AT2G02760EnsemblPlants:AT2G02760.1entrez:814805
Gene3D:3.10.110.10GeneID:814805Genevisible:P42745GO:GO:0000209
GO:GO:0004842GO:GO:0005524GO:GO:0005829GO:GO:0006281
GO:GO:0006511GO:GO:0010228GO:GO:0031625GO:GO:0033523
GO:GO:0043161GO:GO:0061630Gramene:AT2G02760.1hmmpanther:PTHR24067
hmmpanther:PTHR24067:SF120HOGENOM:HOG000233454InParanoid:P42745IntAct:P42745
InterPro:IPR000608InterPro:IPR016135InterPro:IPR023313KEGG:ath:AT2G02760
KO:K10573OMA:PVPDNVMPaxDb:P42745Pfam:P42745
Pfam:PF00179Pfscan:PS50127PhylomeDB:P42745PIR:S43783
PRIDE:P42745PRO:PR:P42745PROSITE:PS00183PROSITE:PS50127
ProteinModelPortal:P42745Proteomes:UP000006548RefSeq:NP_565289.1scanprosite:PS00183
SMR:P42745STRING:3702.AT2G02760.1SUPFAM:SSF54495TAIR:AT2G02760
tair10-symbols:ATUBC2tair10-symbols:UBC2UniGene:At.203UniPathway:UPA00143
UniProt:P42745
Coordinates (TAIR10) chr2:+:774271..775149
Molecular Weight (calculated) 17280.30 Da
IEP (calculated) 5.20
GRAVY (calculated) -0.56
Length 152 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)