AT1G78450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SOUL heme-binding family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G17100.1); Has 640 Blast hits to 629 proteins in 68 species: Archae - 2; Bacteria - 20; Metazoa - 147; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29517147..29517910 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25339.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.73 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||
| Length | 225 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEAALSIFKL SFLLTLLSGG SDLIDSLPPN CNRAECPSYE VVHAGNGYEI HRYNTTVWIS TEPIQDISLN EASGNGWNQL SDYMNGNNDY HQRIEIALPY 101: ITQVSQNLST FIVSFFVPKA FQPDPPPGNN LHVQRWDSRY VAVKQISGYV ADHKIGKQVA ELKASLQGTV WAKAIEKSRE TGGVGSAWAY TVAQFSWPFQ 201: WSQRVNEIWF PFEMEDEETV SIVTQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)