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AT1G78210.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
peroxisome 0.796
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G09430.1); Has 8308 Blast hits to 8306 proteins in 1517 species: Archae - 98; Bacteria - 5942; Metazoa - 236; Fungi - 70; Plants - 380; Viruses - 0; Other Eukaryotes - 1582 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0596eggNOG:KOG1454EMBL:AK226471EMBL:AY081356
EMBL:BT002162EMBL:CP002684EnsemblPlants:AT1G78210EnsemblPlants:AT1G78210.1
entrez:844157ESTHER:arath-AT1G78210Gene3D:3.40.50.1820GeneID:844157
GO:GO:0016787Gramene:AT1G78210.1hmmpanther:PTHR10992hmmpanther:PTHR10992:SF837
HOGENOM:HOG000237545InterPro:IPR000073InterPro:IPR000639InterPro:IPR029058
KEGG:ath:AT1G78210MEROPS:S33.A19OMA:ERSDIFQPfam:PF12695
Pfam:PF12697PhylomeDB:Q8RXC1PRINTS:PR00111PRINTS:PR00412
Proteomes:UP000006548RefSeq:NP_565173.1SMR:Q8RXC1STRING:3702.AT1G78210.1
SUPFAM:SSF53474SwissPalm:Q8RXC1TAIR:AT1G78210UniGene:At.18012
UniProt:Q8RXC1
Coordinates (TAIR10) chr1:-:29422820..29424294
Molecular Weight (calculated) 35662.90 Da
IEP (calculated) 9.98
GRAVY (calculated) -0.11
Length 314 amino acids
Sequence (TAIR10)
(BLAST)
001: MTGCFSLSEA LERTYKSGFK RSGLRPVTID LKDGTVVNFW VSKTKPESKP KPNLLLIHGL GATAIWQWYD VARRLSRYFN LYIPDLVFFG GSSTTRPERS
101: DIFQAQTLMR ALEAQSVKKF SLVGLSYGGF VGYRMASMYA DAVEKVVICC AAVCVEEKDM KAGVFKVSDL DEASKILVPE SVKKLRELMG YIFYKPALAR
201: LVPTCLLHDF IEHALTRDNM EEKRELIKAI PKDRIISEIP KLKQPTLIIW GEHDQVFPLE MGKRLEKHVG DNGKLVIIKR TGHIFNFEKP KKFIKLLKSF
301: LLETSKPQIP VSNV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)