AT1G77420.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:vacuole 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G16120.1); Has 4552 Blast hits to 4550 proteins in 1360 species: Archae - 49; Bacteria - 3106; Metazoa - 121; Fungi - 218; Plants - 474; Viruses - 41; Other Eukaryotes - 543 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:29093641..29095442 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 42821.70 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.48 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||
Length | 382 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDRALTPRFD TPATLSPFRY RYGSSLAITR RFAPAIVCAK RSPIDGVSDE LNLIASQNLD QAPARRLARS AFVDLQLQLD HCLFKKAPSG IRTEEWYERN 101: SKGEDIFCKS WLPKSGDEIK AAVCFCHGYG STCTFFFDGI AKQIAGFGYG VYAIDHPGFG LSDGLHGHIP SFDDLADNAI EQFTKMKGRS ELRNLPRFLL 201: GQSMGGAVAL KIHLKEPQAW DGLILVAPMC KISEDVKPPP LVLKTLILMS TLFPKAKLFP KRDLSDFFFR DLSKRKLCEY DVICYDDQTR LKTAVELLNA 301: TRDIEMQVDK VSLPLLILHG DTDKVTDPTV SKFLHKHAVS QDKTLKLYPG GYHCILEGDT DENIFTVIND IVAWLDARVD PK |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)