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AT1G76710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SET domain group 26
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SET domain group 26 (SDG26); FUNCTIONS IN: histone-lysine N-methyltransferase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, histone methylation; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), Post-SET domain (InterPro:IPR003616), AWS (InterPro:IPR006560); BEST Arabidopsis thaliana protein match is: histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (TAIR:AT1G77300.2); Has 5533 Blast hits to 5441 proteins in 455 species: Archae - 0; Bacteria - 385; Metazoa - 2333; Fungi - 552; Plants - 1033; Viruses - 4; Other Eukaryotes - 1226 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G76710-MONOMERBioCyc:ARA:GQT-1443-MONOMERBioGrid:29224EC:2.1.1.43
eggNOG:COG2940eggNOG:KOG4442EMBL:AB493538EMBL:AC010718
EMBL:AF408059EMBL:BT001913EMBL:CP002684EnsemblPlants:AT1G76710
EnsemblPlants:AT1G76710.1EnsemblPlants:AT1G76710.2entrez:844005GeneID:844005
Genevisible:Q84WW6GO:GO:0000775GO:GO:0005634GO:GO:0006281
GO:GO:0009908GO:GO:0010224GO:GO:0010228GO:GO:0016571
GO:GO:0018024Gramene:AT1G76710.1Gramene:AT1G76710.2hmmpanther:PTHR22884
HOGENOM:HOG000034097InParanoid:Q84WW6IntAct:Q84WW6InterPro:IPR001214
InterPro:IPR003616InterPro:IPR006560iPTMnet:Q84WW6KEGG:ath:AT1G76710
OMA:FIDATRKPaxDb:Q84WW6Pfam:PF00856Pfam:Q84WW6
Pfscan:PS50280Pfscan:PS50868Pfscan:PS51215PhylomeDB:Q84WW6
PIR:E96795PRIDE:Q84WW6PRO:PR:Q84WW6PROSITE:PS50280
PROSITE:PS50868PROSITE:PS51215ProteinModelPortal:Q84WW6Proteomes:UP000006548
RefSeq:NP_177797.2RefSeq:NP_974158.1SMART:SM00317SMART:SM00508
SMART:SM00570SMR:Q84WW6STRING:3702.AT1G76710.1SUPFAM:SSF82199
TAIR:AT1G76710tair10-symbols:SDG26UniGene:At.70058UniProt:Q84WW6
Coordinates (TAIR10) chr1:-:28789887..28792371
Molecular Weight (calculated) 55287.50 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.74
Length 492 amino acids
Sequence (TAIR10)
(BLAST)
001: MQFSCDPDQE GDELPQYEHI YQNDFSYRKH KKQKEEDISI CECKFDFGDP DSACGERCLN VITNTECTPG YCPCGVYCKN QKFQKCEYAK TKLIKCEGRG
101: WGLVALEEIK AGQFIMEYCG EVISWKEAKK RAQTYETHGV KDAYIISLNA SEAIDATKKG SLARFINHSC RPNCETRKWN VLGEVRVGIF AKESISPRTE
201: LAYDYNFEWY GGAKVRCLCG AVACSGFLGA KSRGFQEDTY VWEDGDDRYS VDKIPVYDSA EDELTSEPSK NGESNTNEEK EKDISTENHL ESTALNIQQQ
301: SDSTPTPMEE DVVTETVKTE TSEDMKLLSQ NSQEDSSPKT AIVSRVHGNI SKIKSESLPK KRGRPFSGGK TKNVAQKHVD IANVVQLLAT KEAQDEVLKY
401: EEVKKEAAVR LSSLYDEIRP AIEEHERDSQ DSVATSVAEK WIQASCNKLK AEFDLYSSVI KNIASTPIKP QDTKTKVAEA GNEDHIKLLE AK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)