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AT1G75210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; FUNCTIONS IN: 5'-nucleotidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (InterPro:IPR008380), Purine 5'-nucleotidase (InterPro:IPR016695); BEST Arabidopsis thaliana protein match is: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase (TAIR:AT5G48960.1); Has 679 Blast hits to 675 proteins in 116 species: Archae - 0; Bacteria - 48; Metazoa - 445; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G75210-MONOMEReggNOG:ENOG410XQAVeggNOG:KOG2469EMBL:AY092976
EMBL:BT003378EMBL:CP002684EnsemblPlants:AT1G75210EnsemblPlants:AT1G75210.1
entrez:843858Gene3D:3.40.50.1000GeneID:843858GO:GO:0016787
Gramene:AT1G75210.1hmmpanther:PTHR12103hmmpanther:PTHR12103:SF21HOGENOM:HOG000277902
InterPro:IPR008380InterPro:IPR023214KEGG:ath:AT1G75210ncoils:Coil
OMA:FHDDNRAPANTHER:PTHR12103Pfam:PF05761PhylomeDB:Q8RWN4
Proteomes:UP000006548RefSeq:NP_177657.2SMR:Q8RWN4STRING:3702.AT1G75210.1
SUPFAM:SSF56784TAIR:AT1G75210TIGRfam:TIGR02244TIGRFAMs:TIGR02244
UniGene:At.23664UniProt:Q8RWN4
Coordinates (TAIR10) chr1:+:28223990..28228751
Molecular Weight (calculated) 74317.60 Da
IEP (calculated) 7.35
GRAVY (calculated) -0.47
Length 642 amino acids
Sequence (TAIR10)
(BLAST)
001: MSEWFISRNP TFSTAFPSSC ITVVNPNFIL LSSEFDSYTP QCLFNSLTTT MRLSKRQLSL PLSLCFSTFS PRSRFHHFPG KYPAPRREFL HTTGTSQLCF
101: KSSMEDQKPS ALSENVLQFH TVGSRDGCDV PHEWSSPEGG KKIDISNQIF CNRSLNMKNI IAVGFDMDYT LAQYKSETFE SLAYDGTVRK LVYDLGYPNE
201: LLEWTFDWNY MVRGLVLDKK RGNILKMDRH KYVKVAYHGF RELSKEDKVE IYGSSLVRDS FDEPDYALID TLFSLAEAYL FAQLVDFKDN NPEKVPKDVD
301: YARMYKDVRA AVDLCHRDGT LKQMVAKEPN RYINEDTTIV PLIKMIRDSG RSTFLVTNSL WDYTNIVMNF LCGGRTVHGP HTCNFDWLQY FDVVITGSAK
401: PGFFHEDSRA NLFEVEPQSG MLINTDNGTP MAQVGDPSPK ILLKSKDKGC RVFQGGNVGH LHSLLSIESS SQVLYVGDHI YGDILRSKKI LGWRTMLVVP
501: ELEKEVELLW ELRNMRKDLI LMRNERDSVE DKIHHLNWSL KFEDINENNK HEMLSALKDL ESKRDKVRQS HQQAQRECHQ KFHKVWGQLM KTGYQSSRFA
601: HQVERFACLY TSQVSNLRLY SPDKYYRPSE DFMSHEFHLL PL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)