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AT1G74730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1118)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1118); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1118) (TAIR:AT5G08050.1); Has 78 Blast hits to 78 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXSCeggNOG:ENOG4111RQREMBL:AF386985EMBL:BT002152
EMBL:CP002684EnsemblPlants:AT1G74730EnsemblPlants:AT1G74730.1entrez:843812
GeneID:843812GO:GO:0009507GO:GO:0009534GO:GO:0009535
GO:GO:0016021Gramene:AT1G74730.1hmmpanther:PTHR31425hmmpanther:PTHR31425:SF3
HOGENOM:HOG000238002InterPro:IPR009500KEGG:ath:AT1G74730OMA:DENWSKQ
Pfam:PF06549PhylomeDB:Q94F10Proteomes:UP000006548RefSeq:NP_565091.1
STRING:3702.AT1G74730.1TAIR:AT1G74730TMHMM:TMhelixUniGene:At.45891
UniGene:At.48374UniProt:Q94F10
Coordinates (TAIR10) chr1:+:28078995..28079831
Molecular Weight (calculated) 20736.40 Da
IEP (calculated) 9.99
GRAVY (calculated) 0.39
Length 198 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVVGAPISS PAAQLQTQFL SNPILPRFRR SFSTGKSPAT FSVVAMAPQK KVNKYDAKWK KQWYGAGLFF EGSEQINVDV FKKLEKRKVL SNVEKSGLLS
101: KAEGLGLTLS SLEKLKVFSK AEDLGLLSLL ENLAGTSPAV LASAALPALT AAIVAVVLIP DDSTTLVVAQ AVLAGALALT GVVLLVGSVV LDGLQEAD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)